Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03524 and BPUM_2100

See DNA alignment / Visit BSNT_03524 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence pep-align/BSNT_03524___yqjY.1.24716.seq
#    -bsequence pep-align/BPUM_2100___yqjY.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03524___yqjY-BPUM_2100___yqjY.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03524___yqjY-BPUM_2100___yqjY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03524___yqjY
# 2: BPUM_2100___yqjY
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 166
# Identity:      94/166 (56.6%)
# Similarity:   117/166 (70.5%)
# Gaps:          10/166 ( 6.0%)
# Score: 510.0
# 
#
#=======================================

BSNT_03524___      1 ------MDIRTITSSDYEMVTSVLNEWWGGRQLKEKLPRLFFEHFQDTSF     44
                           :.||.:..||:..|:||:..|||||.|:.|||:|||||||.|||
BPUM_2100___y      1 MKRGEVIMIRQVKPSDFYAVSSVIQSWWGGRDLRAKLPKLFFEHFQQTSF     50

BSNT_03524___     45 ITSEHNSMTGFLIGFQSQSDPETAYIHFSGVHPDFRKMQIGKQLYDVFIE     94
                     :..|...:.|||:||.|||..:.|||||.|||||.||::|||.||..|.|
BPUM_2100___y     51 VVVEKGELIGFLVGFLSQSHSDEAYIHFVGVHPDHRKLKIGKILYQAFYE    100

BSNT_03524___     95 TVKQRGCTRVKCVTSPANKVSIAYHTKLGFDIEKGTKTVNGISVFANYDG    144
                     ..::.|.|.:|.||:|.|:|||||||||||.||||.|||:|||||::|||
BPUM_2100___y    101 AAQKEGRTTIKAVTAPVNRVSIAYHTKLGFQIEKGDKTVDGISVFSDYDG    150

BSNT_03524___    145 PGQDRVLFVKNI----    156
                     ..:|||||||.:    
BPUM_2100___y    151 IHEDRVLFVKKLEEKV    166


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.