Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03522 and BPUM_2099

See DNA alignment / Visit BSNT_03522 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:03
# Commandline: needle
#    -asequence pep-align/BSNT_03522___yqkA.1.24716.seq
#    -bsequence pep-align/BPUM_2099___yqkA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03522___yqkA-BPUM_2099___yqkA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03522___yqkA-BPUM_2099___yqkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03522___yqkA
# 2: BPUM_2099___yqkA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 348
# Identity:     142/348 (40.8%)
# Similarity:   201/348 (57.8%)
# Gaps:          28/348 ( 8.0%)
# Score: 705.0
# 
#
#=======================================

BSNT_03522___      1 MIEFLQHKEDTIAREILAVQIPAYIKETEIIGFDGIPALQEKVKDIQASH     50
                     ||..|..:....|::||.:|:.||.:|.|.||:..:|.|::.||||..:.
BPUM_2099___y      1 MIIRLDQQNKEQAKQILHIQLAAYQREAEQIGYQDLPPLKQTVKDIMKTD     50

BSNT_03522___     51 ERFAGYRKNGKLIGVISYEKNMHHLTICRLVVHPDGFRKGIGRALLQFVI    100
                     |:|.|:...|:|:|:.|||.:...:.:.||.|||....:|||..|:||:|
BPUM_2099___y     51 EKFIGFETEGQLLGIASYEMHEDRIVLSRLAVHPHHVHQGIGTKLMQFII    100

BSNT_03522___    101 DHNEDAEKIEVVTAENNTPAVSLYTQAGFQKAETVKAAQGLLLSVFHLYP    150
                     :|.   ..||:.|||.||||:.||.:.|||:.:.::....|:|:......
BPUM_2099___y    101 NHQ---LPIELTTAEANTPAIQLYEKLGFQQTDRLQVENNLILTKMERSM    147

BSNT_03522___    151 KRKVEIILYNEKWAECFDEEKERLKLVFGPEIIAVHHIGSTSIPNMAAKP    200
                     .||||:|.|...|.:....|..:||.|.|...:..||||||||..|||||
BPUM_2099___y    148 LRKVEVIEYQTSWPDECRRELAKLKEVVGSNWVNGHHIGSTSIKGMAAKP    197

BSNT_03522___    201 IIDMLIEVRSIEAVSQFDEQMKANGYTPKGENGIAGRRYFQKGGNKRTHH    250
                     |||:|:||:.|..:.:.:...:..||.|.||.|:.|||:|:|||..|:||
BPUM_2099___y    198 IIDILLEVKHISDLDECNHLFRQLGYEPLGEYGLQGRRFFRKGGLNRSHH    247

BSNT_03522___    251 VHMYEQGNPAIERHLLFRDYLRAHPNIAKEYAVLKKQLAAQHPDSINQYI    300
                     ||.||.|:..::|||:|||||:|.|..|:.||..|:|||..||:.:..||
BPUM_2099___y    248 VHAYETGHNDVKRHLVFRDYLKAAPERAEAYADKKRQLAKAHPEDMENYI    297

BSNT_03522___    301 QGKDEWIKTAEENAKRWK-----KGRNNANGSIVCYNSENDENGGFTL    343
                     .|||..||..|:.|.:|.     |||:.                    
BPUM_2099___y    298 NGKDAIIKEIEQEAYKWSKQLKGKGRDK--------------------    325


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