Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03520 and BPUM_2098

See DNA alignment / Visit BSNT_03520 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:02
# Commandline: needle
#    -asequence pep-align/BSNT_03520___yqkB.1.24716.seq
#    -bsequence pep-align/BPUM_2098___yqkB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03520___yqkB-BPUM_2098___yqkB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03520___yqkB-BPUM_2098___yqkB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03520___yqkB
# 2: BPUM_2098___yqkB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 108
# Identity:      62/108 (57.4%)
# Similarity:    79/108 (73.1%)
# Gaps:           1/108 ( 0.9%)
# Score: 306.0
# 
#
#=======================================

BSNT_03520___      1 MNIHVTDAAKQALQQAFDANPGKKAQLRYDAEGCGCAVSGVPTIWLAEEL     50
                     |.||:|:.|...|.:....:..|:..||||::||||||||||.|||..|.
BPUM_2098___y      1 MYIHITEPAAAFLTKRQAEHETKELLLRYDSDGCGCAVSGVPMIWLIGER     50

BSNT_03520___     51 TGQCEQLETN-GIPLYIQSSQKVFFDDQMTIDYNEKAKTLALKSPAEMLS     99
                     ||:.|||:.| ...|||.::||||||::||||:||||.||.||||.::||
BPUM_2098___y     51 TGEWEQLKHNQPFKLYIHTAQKVFFDEEMTIDFNEKANTLMLKSPQQILS    100

BSNT_03520___    100 PRMSILVK    107
                     |||.||:|
BPUM_2098___y    101 PRMGILLK    108


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