Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02107 and BPUM_2096
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:33
# Commandline: needle
# -asequence pep-align/BSNT_02107___rapA.1.24716.seq
# -bsequence pep-align/BPUM_2096___rapA3.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02107___rapA-BPUM_2096___rapA3.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02107___rapA-BPUM_2096___rapA3.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02107___rapA
# 2: BPUM_2096___rapA3
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 423
# Identity: 190/423 (44.9%)
# Similarity: 265/423 (62.6%)
# Gaps: 50/423 (11.8%)
# Score: 954.5
#
#
#=======================================
BSNT_02107___ 1 MKQTIPSSYVGLKINEWYTHIRQFHVAEAERVKLEVEREIEDMEEDQDLL 50
||..:.|..||:||||||..|..|||.:||::|.|:|:||.:||:||:||
BPUM_2096___r 1 MKLKLSSPQVGIKINEWYRQICGFHVMKAEKLKAEIEQEILEMEQDQNLL 50
BSNT_02107___ 51 LYYSLMEFRHRVMLDYIKPFGEDTSQLEFSELLEDIEGNQYKLTGLLEYY 100
|:|.||:|||:|||:|.:|..:.::..|...|||.||.:|.|||.:||||
BPUM_2096___r 51 LFYQLMDFRHKVMLEYFEPAKKASNDEEIKNLLETIEHSQTKLTDMLEYY 100
BSNT_02107___ 101 FNFFRGMYEFKQKMFVSAMMYYKRAEKNLALVSDDIEKAEFAFKMAEIFY 150
.:||.||:||:|:.::||:.||:.|||.|.|:|||||:|||.||:|||:|
BPUM_2096___r 101 VHFFTGMFEFEQQNYLSAIAYYRSAEKKLNLISDDIERAEFYFKLAEIYY 150
BSNT_02107___ 151 NLKQTYVSMSYAVQALETYQMYETYTVRRIQCEFVIAGNYDDMQYPERAL 200
::|||:.||.||:|||:||..|.|||:|.|.|||||..||||::..|.||
BPUM_2096___r 151 HMKQTHFSMHYALQALDTYSAYRTYTLRIIHCEFVIGANYDDLKCYEHAL 200
BSNT_02107___ 201 PHLELALDLAKKEGNPRLISSALYNLGNCYEKMGELQKAAEYFEKSVSIC 250
|:.:.||:.|:..||||:|.|||:||||||.:|.:|.:|:.|.:.|:.:.
BPUM_2096___r 201 PYFKNALNRARSIGNPRVIGSALFNLGNCYYQMNDLAEASRYLKDSLEVF 250
BSNT_02107___ 251 KSEKFDNLPHS---IYSLTQVLYKQKNDAEAQKKYREGLEIARQYSDELF 297
:.|...:|..| ::.|||:|:|||...|:...|::|:..|.:..||::
BPUM_2096___r 251 EKENLTHLNRSLDPLFMLTQILFKQKQIEESLTLYQKGIMKACELEDEIY 300
BSNT_02107___ 298 VELFQFLHALYGKNIDTE--SVSHTFQFLEEHMLYPYIEELAHDAAQFYI 345
:..||||.||| :|.| .:..|...||:..|||.|||||.|||.:|.
BPUM_2096___r 301 ICKFQFLKALY---VDAEIAIIDDTLDLLEDKRLYPDIEELALDAAHYYN 347
BSNT_02107___ 346 ENGQPEKALSFYEKMVHAQKQIQRGDCLYEI------------------- 376
|.|..|.:..|||:.:.|..:||.|..|||.
BPUM_2096___r 348 ELGLYEASTRFYERKIQAISKIQNGGHLYENEFDSSFIGSNCRIIGHESA 397
BSNT_02107___ 376 ----------------------- 376
BPUM_2096___r 398 TIGREPYGTGGQTPYNSGDYRIS 420
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