Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03511 and BPUM_2090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:02
# Commandline: needle
# -asequence pep-align/BSNT_03511___nudF.1.24716.seq
# -bsequence pep-align/BPUM_2090___nudF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03511___nudF-BPUM_2090___nudF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03511___nudF-BPUM_2090___nudF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03511___nudF
# 2: BPUM_2090___nudF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 185
# Identity: 136/185 (73.5%)
# Similarity: 164/185 (88.6%)
# Gaps: 0/185 ( 0.0%)
# Score: 713.0
#
#
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BSNT_03511___ 1 MKSLEEKTIAKEQIFSGKVIDLYVEDVELPNGKASKREIVKHPGAVAVLA 50
||..||||::.:::::||:|||.:|||||||||..||||:||||||||:|
BPUM_2090___n 1 MKDFEEKTLSTKELYNGKIIDLVLEDVELPNGKQGKREIIKHPGAVAVIA 50
BSNT_03511___ 51 VTDEGKIIMVKQFRKPLERTIVEIPAGKLEKGEEPEYTALRELEEETGYT 100
.|||.|||:|||:||.|||.||||||||||.||||.:|||||||||||||
BPUM_2090___n 51 RTDENKIILVKQYRKALERAIVEIPAGKLEPGEEPAHTALRELEEETGYT 100
BSNT_03511___ 101 AKKLTKITAFYTSPGFADEIVHVFLAEELSVLEEKRELDEDEFVEVMEVT 150
.:||.|:|||||||||||||||::||::|..||||||||||||||||||:
BPUM_2090___n 101 TQKLQKLTAFYTSPGFADEIVHMYLADQLIPLEEKRELDEDEFVEVMEVS 150
BSNT_03511___ 151 LEDALKLVESREVYDAKTAYAIQYLQLKEALQAQK 185
||:||.|:|.:.:||||||||||||||:|.|::.|
BPUM_2090___n 151 LEEALHLIEKQHIYDAKTAYAIQYLQLQEVLKSTK 185
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