Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03504 and BPUM_2087

See DNA alignment / Visit BSNT_03504 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence pep-align/BSNT_03504___yqkK.1.24716.seq
#    -bsequence pep-align/BPUM_2087___yqkK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03504___yqkK-BPUM_2087___yqkK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03504___yqkK-BPUM_2087___yqkK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03504___yqkK
# 2: BPUM_2087___yqkK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 78
# Identity:      40/78 (51.3%)
# Similarity:    45/78 (57.7%)
# Gaps:          12/78 (15.4%)
# Score: 164.0
# 
#
#=======================================

BSNT_03504___      1 MAKSQAKKKREHRLRNGGRDVLLSRGSTPSFSTHERLTKSKKEILN--KR     48
                     |.||.|||||||..|...|:..||||:.|.||||||.||:|:|.|.  .|
BPUM_2087___y      1 MGKSNAKKKREHLERQHSRNPELSRGNMPHFSTHERKTKTKQEALQHMMR     50

BSNT_03504___     49 KHK--NPYDHTAVDDKDF---FVPQKAA     71
                     |||  |.|||...|.|.|   |:     
BPUM_2087___y     51 KHKRRNAYDHYQEDHKHFYFAFL-----     73


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