Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03502 and BPUM_2085
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence pep-align/BSNT_03502___spoIIM.1.24716.seq
# -bsequence pep-align/BPUM_2085___spoIIM.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03502___spoIIM-BPUM_2085___spoIIM.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03502___spoIIM-BPUM_2085___spoIIM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03502___spoIIM
# 2: BPUM_2085___spoIIM
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 158/215 (73.5%)
# Similarity: 190/215 (88.4%)
# Gaps: 1/215 ( 0.5%)
# Score: 824.0
#
#
#=======================================
BSNT_03502___ 1 MRKISYKDMFLRHVKDHLSLYIFVSVLFFMGVIFGAIIVNSMTISQKEDL 50
|||.|:|:..|:|||||||:|:||||||.|||||||||||||||||||||
BPUM_2085___s 1 MRKKSWKEHLLQHVKDHLSIYLFVSVLFLMGVIFGAIIVNSMTISQKEDL 50
BSNT_03502___ 51 YYYLSQFFGQLSDGKQASSADMFGQSIFHNAKYLGLMWILGISVIGMPII 100
:|||:||||||::.|.|.|.:||.||..|:.||||||||||||:||:|:|
BPUM_2085___s 51 FYYLNQFFGQLTNEKAAESKEMFLQSFLHHMKYLGLMWILGISIIGLPLI 100
BSNT_03502___ 101 FIMIFLKGIVVGFTVGFLVNQMGVSGFFLSFVSVLPQNVLLIPAYLIMGT 150
|:|||||||||||||||||||||:||||||||||||||:|||||||::||
BPUM_2085___s 101 FLMIFLKGIVVGFTVGFLVNQMGLSGFFLSFVSVLPQNILLIPAYLVIGT 150
BSNT_03502___ 151 CAIAFSLKLIRQLFVKRSLHDAPIQWFGRYAFVLLVILFLALISSLFEAY 200
||||||::||.|||:|:::..||:|||.|||.|||:||.||.:||.||:|
BPUM_2085___s 151 CAIAFSIRLIGQLFMKKTISQAPVQWFARYASVLLMILALAALSSFFESY 200
BSNT_03502___ 201 LSPVLMEKLTSRLF- 214
:|.:||:||...||
BPUM_2085___s 201 VSFMLMKKLAGVLFT 215
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