Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03498 and BPUM_2083

See DNA alignment / Visit BSNT_03498 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:01
# Commandline: needle
#    -asequence pep-align/BSNT_03498.1.24716.seq
#    -bsequence pep-align/BPUM_2083.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03498-BPUM_2083.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03498-BPUM_2083.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03498
# 2: BPUM_2083
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 78
# Identity:      52/78 (66.7%)
# Similarity:    64/78 (82.1%)
# Gaps:           3/78 ( 3.8%)
# Score: 304.0
# 
#
#=======================================

BSNT_03498         1 ---MGRFLKTAVDALKVFILFTGFTALFYYAMIWVNQEYENYHRYDKPEG     47
                        |.:::||..:.:||||||||||.||||||||:|.|||:|||||||||
BPUM_2083          1 MRIMRKWIKTTGEVMKVFILFTGFTVLFYYAMIWINSEYESYHRYDKPEG     50

BSNT_03498        48 SAVKVVEMDQDEKGGWFDRLIFFYQNGE     75
                     :|:||:||||..:..|.||||:||||||
BPUM_2083         51 AAIKVMEMDQPNQDNWQDRLIYFYQNGE     78


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