Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03498 and BPUM_2083
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_03498.1.24716.seq
# -bsequence dna-align/BPUM_2083.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03498-BPUM_2083.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03498-BPUM_2083.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03498
# 2: BPUM_2083
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity: 169/244 (69.3%)
# Similarity: 169/244 (69.3%)
# Gaps: 23/244 ( 9.4%)
# Score: 601.5
#
#
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BSNT_03498 1 ---------ATGGGAAGATTCCTGAAAACAGCTGTCGATGCATTGAAAGT 41
|||.|||.||...|.||||||.|.|..||.|...||||.||
BPUM_2083 1 ATGAGAATCATGCGAAAATGGATCAAAACAACAGGTGAAGTGATGAAGGT 50
BSNT_03498 42 TTTCATCCTGTTTACCGGTTTTACCGCTTTGTTCTATTATGCTATGATAT 91
.||.|||.||||.||.||||||||||...|||||||||||||||||||||
BPUM_2083 51 ATTTATCTTGTTCACTGGTTTTACCGTCCTGTTCTATTATGCTATGATAT 100
BSNT_03498 92 GGGTGAATCAAGAGTATGAAAACTATCATCGGTATGATAAACCGGAAGGC 141
||.|.|||..|||.|||||||.|||.|||||.|||||||||||.||.||.
BPUM_2083 101 GGATAAATTCAGAATATGAAAGCTACCATCGTTATGATAAACCAGAGGGT 150
BSNT_03498 142 TCCGCTGTAAAAGTTGTTGAAATGGATCA---GGATGAAAAAGGCGGA-- 186
.|.||..|.|||||..|.||||||||||| |.||.|| ||
BPUM_2083 151 GCAGCAATTAAAGTGATGGAAATGGATCAGCCGAATCAA-------GATA 193
BSNT_03498 187 --TGGTTCGACCGGTTGATCTTTTTTTACCAAAACGGGGAGTAG 228
|||...||.||.|||||.|.||||||.|||||||||||||||
BPUM_2083 194 ACTGGCAAGATCGATTGATTTATTTTTATCAAAACGGGGAGTAG 237
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