Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03489 and BPUM_2076

See DNA alignment / Visit BSNT_03489 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_03489___sigF.1.24716.seq
#    -bsequence pep-align/BPUM_2076___sigF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03489___sigF-BPUM_2076___sigF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03489___sigF-BPUM_2076___sigF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03489___sigF
# 2: BPUM_2076___sigF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     224/255 (87.8%)
# Similarity:   242/255 (94.9%)
# Gaps:           0/255 ( 0.0%)
# Score: 1136.0
# 
#
#=======================================

BSNT_03489___      1 MDVEVKKNGKNAQLKDHEVKELIKQSQNGDQQARDLLIEKNMRLVWSVVQ     50
                     |||||||..|.|||.:.|||||||:||:|||||||||:||||||||||||
BPUM_2076___s      1 MDVEVKKQAKKAQLSNDEVKELIKKSQDGDQQARDLLVEKNMRLVWSVVQ     50

BSNT_03489___     51 RFLNRGYEPDDLFQIGCIGLLKSVDKFDLTYDVRFSTYAVPMIIGEIQRF    100
                     |||||||||||||||||||||||||||||:|||:||||||||||||||||
BPUM_2076___s     51 RFLNRGYEPDDLFQIGCIGLLKSVDKFDLSYDVKFSTYAVPMIIGEIQRF    100

BSNT_03489___    101 IRDDGTVKVSRSLKELGNKIRRAKDELSKTLGRVPTVQEIADHLEIEAED    150
                     |||||||||||||||||||||||:|||||:.||:|||||||::|:|..||
BPUM_2076___s    101 IRDDGTVKVSRSLKELGNKIRRARDELSKSHGRMPTVQEIAEYLDITPED    150

BSNT_03489___    151 VVLAQEAVRAPSSIHETVYENDGDPITLLDQIADNSEEKWFDKIALKEAI    200
                     |||||||||.||||||||||||||||||||||||:|||:|||||||||||
BPUM_2076___s    151 VVLAQEAVRTPSSIHETVYENDGDPITLLDQIADHSEERWFDKIALKEAI    200

BSNT_03489___    201 SDLEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQIKVQM    250
                     .:||||||||||||||||||||||||||||||||||||||||||||::||
BPUM_2076___s    201 KELEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQIQMQM    250

BSNT_03489___    251 DHTDG    255
                     |..:.
BPUM_2076___s    251 DQKES    255


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