Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03487 and BPUM_2075
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence pep-align/BSNT_03487___spoVAA.1.24716.seq
# -bsequence pep-align/BPUM_2075___spoVAA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03487___spoVAA-BPUM_2075___spoVAA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03487___spoVAA-BPUM_2075___spoVAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03487___spoVAA
# 2: BPUM_2075___spoVAA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 132/207 (63.8%)
# Similarity: 162/207 (78.3%)
# Gaps: 1/207 ( 0.5%)
# Score: 688.0
#
#
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BSNT_03487___ 1 MMERRIFIRLRHRVLAHPGDIITVGDAAQIEGQLQLKKKLSAMPLYQVSE 50
|:.:||:|||||:......:|.:.|.|||.|.....:|||.||:|.||:
BPUM_2075___s 1 -MDEQIFLRLRHRIKTGNDQLIYLEDIAQITGDEFAVQKLSKMPIYHVSK 49
BSNT_03487___ 51 KDKNIVILDIIQVLRAIHLQDPTLDVQTVGGAETIVEIQYRKRNLSTVLF 100
||::|.:|||:.|::.|....|.:|:|||||.|.||||...||.||.|||
BPUM_2075___s 50 KDRHIAVLDIMHVVKTIKKTWPAIDIQTVGGTEAIVEIDTGKRQLSPVLF 99
BSNT_03487___ 101 IGVWLLLFIGSCLAIMNFHEDVSMRDVHIALYEIITGERNDYPYLLQIPY 150
:.||||||:|:.|||||||||||||.|||.|||:|||:..::||||||||
BPUM_2075___s 100 VLVWLLLFVGAALAIMNFHEDVSMRLVHIRLYEMITGKTVEHPYLLQIPY 149
BSNT_03487___ 151 SIGLGLGMIVFFNHIFKKRLNEEPSPLEVEMFNYQLDLDQYVAMHENQET 200
|.|||.|||:||||:|||||||||||||||||.||||||.|||:.||:||
BPUM_2075___s 150 SFGLGFGMILFFNHVFKKRLNEEPSPLEVEMFKYQLDLDHYVALKENKET 199
BSNT_03487___ 201 IKDLHDR 207
:||:|||
BPUM_2075___s 200 MKDIHDR 206
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