Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03486 and BPUM_2074

See DNA alignment / Visit BSNT_03486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_03486___spoVAB.1.24716.seq
#    -bsequence pep-align/BPUM_2074___spoVAB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03486___spoVAB-BPUM_2074___spoVAB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03486___spoVAB-BPUM_2074___spoVAB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03486___spoVAB
# 2: BPUM_2074___spoVAB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 141
# Identity:     103/141 (73.0%)
# Similarity:   118/141 (83.7%)
# Gaps:           3/141 ( 2.1%)
# Score: 532.0
# 
#
#=======================================

BSNT_03486___      1 MIVSVLFIIFVGLGGGITVGAGFVAFLTVMGIIPRLMQLTKTMRFVQAYE     50
                     ||...||:..||||||:||||||||||.|:||||||||||||.||:|.||
BPUM_2074___s      1 MIGKWLFVALVGLGGGLTVGAGFVAFLAVLGIIPRLMQLTKTQRFIQGYE     50

BSNT_03486___     51 AAVILGAVCGGWETLHMNHLYLTKWIAVPVGLLAGLFVGMLAAALTEVLN    100
                     ||||.|||.|||.||...||:|:||:.:|:|||||:||||||||||||||
BPUM_2074___s     51 AAVITGAVVGGWATLSEVHLHLSKWLVLPIGLLAGIFVGMLAAALTEVLN    100

BSNT_03486___    101 VLPILAKRIGLRSKIIILLMAIVIGKIAGSLFHWLYFIDHS    141
                     |||||.||||:..|||:||||||:||:.|||||||.:|   
BPUM_2074___s    101 VLPILTKRIGMDGKIILLLMAIVLGKVFGSLFHWLIYI---    138


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