Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03483 and BPUM_2072
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence pep-align/BSNT_03483___spoVAD.1.24716.seq
# -bsequence pep-align/BPUM_2072___spoVAD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03483___spoVAD-BPUM_2072___spoVAD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03483___spoVAD-BPUM_2072___spoVAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03483___spoVAD
# 2: BPUM_2072___spoVAD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 338
# Identity: 279/338 (82.5%)
# Similarity: 310/338 (91.7%)
# Gaps: 0/338 ( 0.0%)
# Score: 1491.0
#
#
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BSNT_03483___ 1 MKLTGKQTWVFEHPIFVNSAGTAAGPKEKDGPLGSLFDKTYDEMHCNQKS 50
|||||||:|||||.::||:.|||||||||:||:|.|.|||||||||:||:
BPUM_2072___s 1 MKLTGKQSWVFEHKLYVNAEGTAAGPKEKEGPIGHLIDKTYDEMHCDQKN 50
BSNT_03483___ 51 WEMAERQLMEDAVNVALQKNNLTKDDIDLLLAGDLLNQNVTANYVARHLK 100
||||||:|||||::.||.|.||.|.||||||||||||||||||||||.||
BPUM_2072___s 51 WEMAERKLMEDAISSALSKANLQKSDIDLLLAGDLLNQNVTANYVARELK 100
BSNT_03483___ 101 IPFLCMFGACSTSMETVAVASALVDGGFAKRALAATSSHNATAERQFRYP 150
|||||:|||||||||:||:||||:|||||.||:|||||||||||||||.|
BPUM_2072___s 101 IPFLCLFGACSTSMESVAIASALIDGGFANRAIAATSSHNATAERQFRNP 150
BSNT_03483___ 151 TEYGGQKPDTATSTVTGSGAVVISQTPGDIQITSATVGKVSDLGITDPFD 200
|||||||||||||||||||||:|||.|..|||||||||:|.|||||||||
BPUM_2072___s 151 TEYGGQKPDTATSTVTGSGAVIISQAPSPIQITSATVGRVMDLGITDPFD 200
BSNT_03483___ 201 MGSAMAPAAADTIKQHFKDLNRTADDYDLILTGDLSGVGSPIVKDILKED 250
||||||||||||||||.:||.||.|||||||||||||:||||:||:|||:
BPUM_2072___s 201 MGSAMAPAAADTIKQHLEDLGRTVDDYDLILTGDLSGIGSPILKDLLKEE 250
BSNT_03483___ 251 GYPVGTKHDDCGLLIYTPDQQVFAGGSGCACSAVVTYSHIFKQLREGNLN 300
|..:|.|||||||:||||||.|||||||||||||||:||||::::.|||.
BPUM_2072___s 251 GIQLGRKHDDCGLIIYTPDQNVFAGGSGCACSAVVTFSHIFQEMKAGNLQ 300
BSNT_03483___ 301 RVFVVATGALLSPTMIQQKETIPTIAHGVVFERAGGAS 338
||.||||||||||.|:||||||||||||||||||||.|
BPUM_2072___s 301 RVLVVATGALLSPMMVQQKETIPTIAHGVVFERAGGES 338
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