Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03482 and BPUM_2071

See DNA alignment / Visit BSNT_03482 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence pep-align/BSNT_03482.1.24716.seq
#    -bsequence pep-align/BPUM_2071___spoVAEB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03482-BPUM_2071___spoVAEB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03482-BPUM_2071___spoVAEB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03482
# 2: BPUM_2071___spoVAEB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 116
# Identity:      98/116 (84.5%)
# Similarity:   109/116 (94.0%)
# Gaps:           0/116 ( 0.0%)
# Score: 529.0
# 
#
#=======================================

BSNT_03482         1 MDYLLAFVCGGAICIVGQLLLDIFKLTPAHVMTSFVVIGAILDGFGIYDK     50
                     ||||:|||.||.||::||||||:.|||||||||:|||.|.||||||||||
BPUM_2071___s      1 MDYLIAFVAGGLICVIGQLLLDVLKLTPAHVMTTFVVAGTILDGFGIYDK     50

BSNT_03482        51 FIEFAGGGATVPIVSFGHSLLHGAMHQAHIHGFIGIGMGIFELTSAGISA    100
                     ||||||.|||||||||||||||||||||.:|||||||:||||||||||||
BPUM_2071___s     51 FIEFAGAGATVPIVSFGHSLLHGAMHQADVHGFIGIGIGIFELTSAGISA    100

BSNT_03482       101 AILFAFIVAVIFKPKG    116
                     ||||:|::|:||||||
BPUM_2071___s    101 AILFSFLIALIFKPKG    116


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.