Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03482 and BPUM_2071
See
Amino acid alignment /
Visit
BSNT_03482 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_03482.1.24716.seq
# -bsequence dna-align/BPUM_2071___spoVAEB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03482-BPUM_2071___spoVAEB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03482-BPUM_2071___spoVAEB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03482
# 2: BPUM_2071___spoVAEB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity: 267/360 (74.2%)
# Similarity: 267/360 (74.2%)
# Gaps: 18/360 ( 5.0%)
# Score: 950.0
#
#
#=======================================
BSNT_03482 1 ATGGACTACCTTTTGGCTTTTGTCTGC-GGCGGGGCCATTTGTATCGTCG 49
|||||.||.|||.|.|||||||| ||| |||||....|||||..||.|.|
BPUM_2071___s 1 ATGGATTATCTTATCGCTTTTGT-TGCAGGCGGACTTATTTGCGTCATTG 49
BSNT_03482 50 GCCAGCTGCTCTTGGATATTTTTAAATTGACGCCAGCTCATGTCATGACA 99
|.|||||..|..|.||..|..|.|||.|||||||.||.|||||||||||.
BPUM_2071___s 50 GTCAGCTTTTACTAGACGTACTCAAACTGACGCCTGCACATGTCATGACT 99
BSNT_03482 100 TCATTTGTTGTAATCGGTGCAATATTAGATGGTTTCGGCATTTACGATAA 149
.|.||||||||....|||.|.||.|||||.||.|||||.|||||.|||||
BPUM_2071___s 100 ACCTTTGTTGTGGCGGGTACCATTTTAGACGGATTCGGTATTTATGATAA 149
BSNT_03482 150 ATTTATTGAATTTGCCGGAGGAGGCGCCACCGTTCCGATCGTCAGCTTCG 199
|||||||||||||||.||.|..||.||.|||||.||.|||||||||||.|
BPUM_2071___s 150 ATTTATTGAATTTGCGGGTGCGGGGGCAACCGTACCAATCGTCAGCTTTG 199
BSNT_03482 200 GTCACAGTCTT-CTGCACGGCGCCATGCATCAGGCGCATATACACGGATT 248
|.||.|| ||| ||.||.||.||.|||||||||||..||.|||||||.||
BPUM_2071___s 200 GCCATAG-CTTGCTTCATGGAGCGATGCATCAGGCAGATGTACACGGGTT 248
BSNT_03482 249 TATCGGAATCGGCATGGGGATTTTTGAGCTGACCTCGGCCGGTATCTCAG 298
.|||||||||||.||.||.||||||||..|.||.||.||.||.||.||||
BPUM_2071___s 249 CATCGGAATCGGGATCGGTATTTTTGAATTAACTTCTGCTGGGATTTCAG 298
BSNT_03482 299 CCGC-----TATTCT--TTTCGCCTTTATCGTAGCTGTTATTTTCAAACC 341
|.|| |||||| |||| ||||| |||.||||.||.|||||
BPUM_2071___s 299 CTGCGATTTTATTCTCATTTC----TTATC---GCTCTTATCTTTAAACC 341
BSNT_03482 342 GAAAGGATAA 351
||||||||||
BPUM_2071___s 342 GAAAGGATAA 351
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.