Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03477 and BPUM_2067

See DNA alignment / Visit BSNT_03477 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_03477___ypuA.1.24716.seq
#    -bsequence pep-align/BPUM_2067___ypuA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03477___ypuA-BPUM_2067___ypuA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03477___ypuA-BPUM_2067___ypuA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03477___ypuA
# 2: BPUM_2067___ypuA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 299
# Identity:     214/299 (71.6%)
# Similarity:   250/299 (83.6%)
# Gaps:           9/299 ( 3.0%)
# Score: 1097.0
# 
#
#=======================================

BSNT_03477___      1 ------MKKIWIGMLAAAVLLLTVPKVSLADAAVGDVIVTLGADLSESDK     44
                           .||..:||:||.:.|:..||||||||||||||||||.||:.:|:
BPUM_2067___y      1 MKEVNMFKKSMLGMMAALLFLIGAPKVSLADAAVGDVIVTLGQDLTPADR     50

BSNT_03477___     45 QKVLDEMNVPDNATTVTVTNKEEHEYLGKYISNAQIGSRAISSSSITIAK     94
                     ||||||:|.|:|||.:.||||||||||||||..:.||:||:|||||||.|
BPUM_2067___y     51 QKVLDELNPPENATKIEVTNKEEHEYLGKYIPRSSIGTRALSSSSITIEK    100

BSNT_03477___     95 KGSGLNVETHNISGITDEMYLNALMTAGVKDAKVYVTAPFEVSGTAALTG    144
                     .|:||.|:||||..||||||||||||||||||||.|||||||||||||||
BPUM_2067___y    101 SGTGLTVDTHNIKTITDEMYLNALMTAGVKDAKVVVTAPFEVSGTAALTG    150

BSNT_03477___    145 LIKAYEVSSDEAISEDVKQVANQELVTTSELGDKIGNENAAALIAKIKEE    194
                     |:||||||||:||.||||||||:||||||:|||.||.:||:|||||||::
BPUM_2067___y    151 LLKAYEVSSDKAIPEDVKQVANEELVTTSKLGDSIGKDNASALIAKIKDD    200

BSNT_03477___    195 FAKNGVPDNKADIEKQVDDAASDLNVTLTDSQKNQLVSLFNKMKNADIDW    244
                     .||||||....::|::||.||||||:.||..||:||:|||:||||.:|||
BPUM_2067___y    201 IAKNGVPKTTKEVEEKVDQAASDLNLNLTQEQKDQLISLFDKMKNINIDW    250

BSNT_03477___    245 GQVSDQLDKAKDKITKFIESDEGKNFIQKVIDFFVSIWNAIVSIFK---    290
                     .||..|:||||||||||||||||||.:||:.||||||||||||:|.   
BPUM_2067___y    251 NQVGSQIDKAKDKITKFIESDEGKNLLQKIWDFFVSIWNAIVSVFTGGK    299


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.