Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03466 and BPUM_2062

See DNA alignment / Visit BSNT_03466 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_03466___ypuD.1.24716.seq
#    -bsequence pep-align/BPUM_2062___ypuD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03466___ypuD-BPUM_2062___ypuD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03466___ypuD-BPUM_2062___ypuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03466___ypuD
# 2: BPUM_2062___ypuD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 114
# Identity:      70/114 (61.4%)
# Similarity:    95/114 (83.3%)
# Gaps:           0/114 ( 0.0%)
# Score: 384.0
# 
#
#=======================================

BSNT_03466___      1 MGRIKTKITILLVLLLLLAGGYMYINDVELKDVPTAIGQTLSSEEEEYTI     50
                     ||:||.|:.||.||||.|..||:|:|.::::|||||||::|::.:::|||
BPUM_2062___y      1 MGKIKLKMAILFVLLLCLGAGYLYMNGMKIEDVPTAIGESLTNNDKDYTI     50

BSNT_03466___     51 QEYKVTKIDGSEYHGVAENGTKIIFNGKKLNQDLSDIKEGDKIKAYFSKS    100
                     .||.:|||||.||:|.|:|||||||:|||...|::|:|:||:||||||..
BPUM_2062___y     51 YEYTITKIDGDEYYGQAKNGTKIIFSGKKFEDDVADLKKGDRIKAYFSNE    100

BSNT_03466___    101 KRIDGLIKVAKVND    114
                     |||||||||.||.:
BPUM_2062___y    101 KRIDGLIKVVKVVN    114


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