Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03458 and BPUM_2058

See DNA alignment / Visit BSNT_03458 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_03458___ribT.1.24716.seq
#    -bsequence pep-align/BPUM_2058___ribT.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03458___ribT-BPUM_2058___ribT.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03458___ribT-BPUM_2058___ribT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03458___ribT
# 2: BPUM_2058___ribT
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 124
# Identity:      82/124 (66.1%)
# Similarity:    99/124 (79.8%)
# Gaps:           7/124 ( 5.6%)
# Score: 440.0
# 
#
#=======================================

BSNT_03458___      1 MLIRYKKSFEKIAMGLLSFMPNEKDLKQLQQTIKDYETDTDRQLFLWKED     50
                     ||||||:||||||||||||||.|||:||||||:|.||.|..|||||||:.
BPUM_2058___r      1 MLIRYKRSFEKIAMGLLSFMPGEKDVKQLQQTMKSYEMDESRQLFLWKDG     50

BSNT_03458___     51 EDIVGAIGVEKKDSEVEIRHISVNPSHRHQGIGKQMMDALKHLFKTQVLV    100
                     |||||||||.|.|::|:|.|||||||||.|||||:|:.|::.:|||:.|:
BPUM_2058___r     51 EDIVGAIGVLKTDNQVQIEHISVNPSHRDQGIGKEMVLAVEEVFKTKTLI    100

BSNT_03458___    101 PNELTQSFFERCQGQQDQDISYNN    124
                     ||||||.||.:|..:.:       
BPUM_2058___r    101 PNELTQGFFHKCHSETN-------    117


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.