Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03457 and BPUM_2057
See
DNA alignment /
Visit
BSNT_03457 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:59
# Commandline: needle
# -asequence pep-align/BSNT_03457___ypuF.1.24716.seq
# -bsequence pep-align/BPUM_2057___ypuF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03457___ypuF-BPUM_2057___ypuF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03457___ypuF-BPUM_2057___ypuF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03457___ypuF
# 2: BPUM_2057___ypuF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 175
# Identity: 105/175 (60.0%)
# Similarity: 134/175 (76.6%)
# Gaps: 2/175 ( 1.1%)
# Score: 553.0
#
#
#=======================================
BSNT_03457___ 1 MYPKAYIDYLVEFHATRDYFECHEILEEYWKEDPPKKRKRYWVGFIQLAV 50
|||:||:.:|.|||.||||||||||||||||||||::||.||||||||||
BPUM_2057___y 1 MYPEAYVAFLHEFHTTRDYFECHEILEEYWKEDPPEQRKEYWVGFIQLAV 50
BSNT_03457___ 51 ALYHHRRQNTAGAKRLMANSIRILKAEHRAVEDLGLDHGRLLELMQSVYE 100
||||.||.|..||||||:||:.:|:|....:.:||||....|:|::.:.:
BPUM_2057___y 51 ALYHQRRGNGKGAKRLMSNSLHLLEANRSVLSNLGLDDEAFLKLLRMLKK 100
BSNT_03457___ 101 QIETGSAYKSIMLPIKDEKLEEACRIECRKKKYTWGQSSALRNIFLIDKH 150
::.....|:|:|||||||.|...|:...:|:..|:||.|.|.:.|||:||
BPUM_2057___y 101 KMAEDMPYESVMLPIKDEALLSLCQEMAQKEGLTFGQESNLSHTFLIEKH 150
BSNT_03457___ 151 RLRDRTDVIREREKEIERRKKSRG- 174
||||||||:.||:|:|| ||||||
BPUM_2057___y 151 RLRDRTDVLLERKKQIE-RKKSRGL 174
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.