Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03456 and BPUM_2055

See DNA alignment / Visit BSNT_03456 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:59
# Commandline: needle
#    -asequence pep-align/BSNT_03456___scpA.1.24716.seq
#    -bsequence pep-align/BPUM_2055___scpA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03456___scpA-BPUM_2055___scpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03456___scpA-BPUM_2055___scpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03456___scpA
# 2: BPUM_2055___scpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 252
# Identity:     195/252 (77.4%)
# Similarity:   221/252 (87.7%)
# Gaps:           1/252 ( 0.4%)
# Score: 976.0
# 
#
#=======================================

BSNT_03456___      1 MEEYQVKIDTFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRV     50
                     |.|||||||:|||||||||||||||||||||||||||||||||||||||.
BPUM_2055___s      1 MLEYQVKIDSFEGPLDLLLHLINRLEIDIYDIPVAKITEQYLLYVHTMRE     50

BSNT_03456___     51 LELDMASEYLVMAATLLSIKSRMLLPKQEEELFEDELL-EEEDPREELIE     99
                     ||||:||||||||||||||||||||||||||||:::|| ||||||||||.
BPUM_2055___s     51 LELDVASEYLVMAATLLSIKSRMLLPKQEEELFDEDLLEEEEDPREELIG    100

BSNT_03456___    100 KLIEYRKYKDAAKDLKEREEERQKSFTKPPSDLSEYAKEVKQSEQKLSVT    149
                     ||||||||||||::|||||||||.:||||||||||:|||.:..:..|.||
BPUM_2055___s    101 KLIEYRKYKDAAQELKEREEERQNAFTKPPSDLSEFAKESEAKDTNLHVT    150

BSNT_03456___    150 VYDMIGAFQKVLKRKKINRPMETTITRQDIPIEARMNEIVHSLKSRGTRI    199
                     ||||:|||||||.||||.:|..:.||||:||||.:||||::.|:....|.
BPUM_2055___s    151 VYDMLGAFQKVLNRKKITKPAPSRITRQEIPIEDKMNEIMNHLRKTKKRT    200

BSNT_03456___    200 NFMDLFPYEQKEHLVVTFLAVLELMKNQLVLIEQEHNFSDIYITGSESIH    249
                     |||.||.::|||||||||||||||||:..:::|||.||.||||.|||:||
BPUM_2055___s    201 NFMTLFQHDQKEHLVVTFLAVLELMKSHQIMLEQEGNFEDIYIIGSETIH    250

BSNT_03456___    250 GA    251
                     .|
BPUM_2055___s    251 DA    252


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