Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03455 and BPUM_2054
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence pep-align/BSNT_03455___ypuH.1.24716.seq
# -bsequence pep-align/BPUM_2054___scpB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03455___ypuH-BPUM_2054___scpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03455___ypuH-BPUM_2054___scpB.aln
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#
# Aligned_sequences: 2
# 1: BSNT_03455___ypuH
# 2: BPUM_2054___scpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 197
# Identity: 161/197 (81.7%)
# Similarity: 181/197 (91.9%)
# Gaps: 0/197 ( 0.0%)
# Score: 828.0
#
#
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BSNT_03455___ 1 MGLDIVNWKAIVEALLYAAGDEGLTKKQLLTVLEIEEPELNTIMADVADE 50
|.|||||||||:|||||||||||||||||::|||:||..|..:|:.|.:|
BPUM_2054___s 1 MTLDIVNWKAIIEALLYAAGDEGLTKKQLMSVLEVEEVALLDMMSAVKEE 50
BSNT_03455___ 51 YREDTRGIELIEYADTYMLSTKKDFAPYLKKLIEVPSKGLSQASLEVLAI 100
|::..||||||||||:|||.|||:::.|||||:|.||||||||:||||||
BPUM_2054___s 51 YQKQERGIELIEYADSYMLLTKKEYSIYLKKLVETPSKGLSQAALEVLAI 100
BSNT_03455___ 101 VSYKQPITRAEIEEIRGVKSERILHSLVAKALLCEVGRADGPGRAILYGT 150
|||||||||:|:||||||||||:|||||||||||||||||||||||||||
BPUM_2054___s 101 VSYKQPITRSEVEEIRGVKSERVLHSLVAKALLCEVGRADGPGRAILYGT 150
BSNT_03455___ 151 TPTFLEQFGLKTLDELPPLPENAEEDVLQEEADLFFENFNQTFEDIK 197
|||||||||||.||||||||||.|.|.:||||||||||||||||:||
BPUM_2054___s 151 TPTFLEQFGLKALDELPPLPENVEADGVQEEADLFFENFNQTFEEIK 197
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