Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03448 and BPUM_2049

See DNA alignment / Visit BSNT_03448 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_03448___rluB.1.24716.seq
#    -bsequence pep-align/BPUM_2049___rluB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03448___rluB-BPUM_2049___rluB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03448___rluB-BPUM_2049___rluB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03448___rluB
# 2: BPUM_2049___rluB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     200/281 (71.2%)
# Similarity:   228/281 (81.1%)
# Gaps:          37/281 (13.2%)
# Score: 1059.0
# 
#
#=======================================

BSNT_03448___      1 -------------------------------------MERLQKVIAHAGV     13
                                                          |||||||||||||
BPUM_2049___r      1 MGNGFLAEIKQTNRLFFHECLFVLSQASKIVHEVKDKMERLQKVIAHAGV     50

BSNT_03448___     14 ASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVEREEPVYF     63
                     |||||||||||||:|.|||:.||||||||..||:|||||||:||||||||
BPUM_2049___r     51 ASRRKAEELIKEGRVTVNGQTVTELGVKVGSSDKIEVNGLKLEREEPVYF    100

BSNT_03448___     64 LLYKPRGVISAAQDDKGRKVVTDFFKNIPQRIYPIGRLDYDTSGLLLLTN    113
                     :|||||||||||:||||||||||||.::|||:|||||||||||||:|:||
BPUM_2049___r    101 MLYKPRGVISAAEDDKGRKVVTDFFDDVPQRLYPIGRLDYDTSGLILITN    150

BSNT_03448___    114 DGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAK    163
                     |||||:|||||||||||||.||:||||.||||||||:||.|:..|||||:
BPUM_2049___r    151 DGEFAHKLMHPKYEIDKTYAAKLKGIPSKELLRKLEKGIMLDHKKTAPAR    200

BSNT_03448___    164 AKLLSLDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHEVIKLKREEYAFLN    213
                     ||:||:||:|||.|:|||||||||||||||||||||:|:|||||.||||:
BPUM_2049___r    201 AKMLSIDKRKQTCIVQLTIHEGRNRQVRRMFEAIGHDVLKLKREHYAFLH    250

BSNT_03448___    214 LRGLHTGDARELTPHEVKRLRALADHGKNAF    244
                     :.|:..||.|||:|||||||||:|||||:||
BPUM_2049___r    251 IEGMRPGDRRELSPHEVKRLRAIADHGKSAF    281


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