Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03446 and BPUM_2048
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence pep-align/BSNT_03446___resA.1.24716.seq
# -bsequence pep-align/BPUM_2048___resA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03446___resA-BPUM_2048___resA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03446___resA-BPUM_2048___resA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03446___resA
# 2: BPUM_2048___resA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 179
# Identity: 129/179 (72.1%)
# Similarity: 151/179 (84.4%)
# Gaps: 3/179 ( 1.7%)
# Score: 699.0
#
#
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BSNT_03446___ 1 MKKKRRLFIRTGILLVLICALGYTIYNAVFAGKESISEGSDAPNFVLEDT 50
.||||.|||||||||::.||.||:||:|||.:|.:.|||.||||||:..
BPUM_2048___r 1 -MKKRRFFIRTGILLVMLAALCYTMYNSVFAKQERVKEGSIAPNFVLQSV 49
BSNT_03446___ 51 NGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVA 100
:|:||||.||||||||||||||||.|||:|||||||||:.||.:||||||
BPUM_2048___r 50 DGERIELKDLKGKGVFLNFWGTWCGPCKQEFPYMANQYEVFKDRGVEIVA 99
BSNT_03446___ 101 VNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEG 150
|||.||.|||.|||:||||||||.:|.||||.:|||::||||||||||||
BPUM_2048___r 100 VNVAESNIAVKNFMESYGVNFPVAMDKDRQVTEAYDITPLPTTFLINPEG 149
BSNT_03446___ 151 KVVKVVTGTMTESMIHEYMNLIKPGETSG 179
||:||:.|||||..::||||||||..:
BPUM_2048___r 150 KVIKVIKGTMTERNVYEYMNLIKPKGS-- 176
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