Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03440 and BPUM_2045

See DNA alignment / Visit BSNT_03440 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence pep-align/BSNT_03440___resD.1.24716.seq
#    -bsequence pep-align/BPUM_2045___resD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03440___resD-BPUM_2045___resD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03440___resD-BPUM_2045___resD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03440___resD
# 2: BPUM_2045___resD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 251
# Identity:     221/251 (88.0%)
# Similarity:   230/251 (91.6%)
# Gaps:          11/251 ( 4.4%)
# Score: 1139.0
# 
#
#=======================================

BSNT_03440___      1 MKVTEGKQGENMDQTNETKILVVDDEARIRRLLRMYLERENYAIDEAENG     50
                                |:.|.:||||||||||||||||:||||||||.|||||||
BPUM_2045___r      1 -----------MEHTTQTKILVVDDEARIRRLLKMYLERENYEIDEAENG     39

BSNT_03440___     51 DEAIAKGLEANYDLILLDLMMPGTDGIEVCRQIREKKATPIIMLTAKGEE    100
                     ||||.|||:::|||||||||||||||||||.|||:|||||||||||||||
BPUM_2045___r     40 DEAIQKGLQSDYDLILLDLMMPGTDGIEVCNQIRDKKATPIIMLTAKGEE     89

BSNT_03440___    101 ANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRRASQTSYFNANTPTKNV    150
                     ||||||||||||||||||||||||||||||||||:|||||.|..|.||:|
BPUM_2045___r     90 ANRVQGFEAGTDDYIVKPFSPREVVLRVKALLRRSSQTSYLNTGTTTKDV    139

BSNT_03440___    151 LVFSHLSIDHDAHRVTADGTEVSLTPKEYELLYFLAKTPDKVYDREKLLK    200
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BPUM_2045___r    140 LVFSHLSIDHDAHRVTADGKEVSLTPKEYELLYFLAKTPDKVYDREKLLK    189

BSNT_03440___    201 EVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWGVGYKFEVGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BPUM_2045___r    190 EVWQYEFFGDLRTVDTHVKRLREKLNKVSPEAAKKIVTVWGVGYKFEVGA    239

BSNT_03440___    251 E    251
                     |
BPUM_2045___r    240 E    240


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.