Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03440 and BPUM_2045
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_03440___resD.1.24716.seq
# -bsequence dna-align/BPUM_2045___resD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03440___resD-BPUM_2045___resD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03440___resD-BPUM_2045___resD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03440___resD
# 2: BPUM_2045___resD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 757
# Identity: 575/757 (76.0%)
# Similarity: 575/757 (76.0%)
# Gaps: 35/757 ( 4.6%)
# Score: 2267.0
#
#
#=======================================
BSNT_03440___ 1 ATGAAAGTAACAGAAGGAAAGCAGGGGGAAAACATGGACCAAACGAAC-G 49
|||||.||.|| ||| .
BPUM_2045___r 1 ---------------------------------ATGGAACACAC-AACTC 16
BSNT_03440___ 50 AAACAAAAATATTAGTAGTTGATGACGAAGCCAGAATTCGCCGCCTTTTA 99
||||.|||||||||||.||.|||||.||.||.||||||||||||||||||
BPUM_2045___r 17 AAACGAAAATATTAGTCGTAGATGATGAGGCAAGAATTCGCCGCCTTTTA 66
BSNT_03440___ 100 AGAATGTATCTTGAACGTGAAAATTATGCTATAGATGAAGCTGAAAATGG 149
|.|||||||.|.||||||||||||||||..||.||||||||.||||||||
BPUM_2045___r 67 AAAATGTATTTAGAACGTGAAAATTATGAAATCGATGAAGCGGAAAATGG 116
BSNT_03440___ 150 TGATGAAGCCATTGCCAAAGGGCTTGAAGCCAATTATGACTTAATTTTGC 199
.|||||.||||||...|||||.||..||.|..||||||||.|.|||||||
BPUM_2045___r 117 AGATGAGGCCATTCAAAAAGGACTCCAATCAGATTATGACCTCATTTTGC 166
BSNT_03440___ 200 TTGATCTGATGATGCCGGGGACTGATGGAATTGAAGTGTGCCGGCAAATT 249
|.|||.|.||||||||.||.||.|||||.|||||||||||....||||||
BPUM_2045___r 167 TCGATTTAATGATGCCTGGCACAGATGGGATTGAAGTGTGTAATCAAATT 216
BSNT_03440___ 250 CGTGAAAAAAAAGCGACACCCATTATTATGCTGACCGCAAAAGGAGAAGA 299
||.||.|||||||||||.||.||.|||||||||||.||||||||||||||
BPUM_2045___r 217 CGAGACAAAAAAGCGACTCCAATCATTATGCTGACGGCAAAAGGAGAAGA 266
BSNT_03440___ 300 AGCAAATCGGGTGCAGGGGTTTGAAGCGGGAACAGATGATTATATTGTTA 349
|||.||.||.|||||.|||||||||||.|||||.|||||.||.||.||.|
BPUM_2045___r 267 AGCCAACCGCGTGCAAGGGTTTGAAGCAGGAACGGATGACTACATCGTGA 316
BSNT_03440___ 350 AGCCGTTCAGCCCGAGAGAAGTCGTGCTGCGTGTAAAGGCCCTTTTGAGA 399
||||.||.|||||..|.|||||.||..|.|||||.|||||..|..|.|||
BPUM_2045___r 317 AGCCTTTTAGCCCACGTGAAGTTGTTTTACGTGTGAAGGCATTGCTCAGA 366
BSNT_03440___ 400 AGAGCATCCCAAACCTCTTATTTCAATGCCAATACACCGACGAAAAATGT 449
|||.|.||.|||||.||||||.|||||.|....|||.|.||.|||.||||
BPUM_2045___r 367 AGATCTTCTCAAACGTCTTATCTCAATACTGGGACAACAACAAAAGATGT 416
BSNT_03440___ 450 GCTCGTGTTTTCACATCTGTCAATAGACCATGATGCTCACCGCGTAACAG 499
.||.||||||||.|||||.|||||.|||||.|||||.||..|.|||||||
BPUM_2045___r 417 ACTTGTGTTTTCTCATCTTTCAATTGACCACGATGCGCATAGAGTAACAG 466
BSNT_03440___ 500 CTGATGGAACAGAAGTGAGCCTGACGCCAAAAGAGTATGAGCTTCTATAT 549
|.|||||.|.|||.||.||.||.|||||.||.||.|||||||||.|||||
BPUM_2045___r 467 CCGATGGCAAAGAGGTCAGTCTCACGCCGAAGGAATATGAGCTTTTATAT 516
BSNT_03440___ 550 TTCTTAGCGAAAACGCCTGACAAGGTGTATGATCGGGAAAAGCTTCTGAA 599
|||.|.||||||||.|||||.|||||.|||||..|.||.|||||..|.||
BPUM_2045___r 517 TTCCTTGCGAAAACACCTGATAAGGTTTATGACAGAGAGAAGCTGTTAAA 566
BSNT_03440___ 600 AGAAGTGTGGCAATATGAGTTTTTTGGTGATTTACGGACAGTGGACACTC 649
||||||.|||||.|||||.||.|||||.||.||..|.|||||.||.||.|
BPUM_2045___r 567 AGAAGTATGGCAGTATGAATTCTTTGGAGACTTGAGAACAGTCGATACCC 616
BSNT_03440___ 650 ACGTCAAACGTTTGAGAGAGAAGCTGAACAAGGTATCTCCGGAAGCTGCG 699
||||||||||..|..|.||.||.|||||.||.||.||.||.|||||||||
BPUM_2045___r 617 ACGTCAAACGACTTCGCGAAAAACTGAATAAAGTGTCACCAGAAGCTGCG 666
BSNT_03440___ 700 AAAAAAATTGTCACAGTATGGGGTGTAGGTTATAAATTTGAGGTCGGCGC 749
||||||||.||.||||||||||||||.||.||.|||||||||||||||||
BPUM_2045___r 667 AAAAAAATCGTGACAGTATGGGGTGTCGGGTACAAATTTGAGGTCGGCGC 716
BSNT_03440___ 750 TGAATGA 756
|||||||
BPUM_2045___r 717 TGAATGA 723
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