Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03439 and BPUM_2044

See DNA alignment / Visit BSNT_03439 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:57
# Commandline: needle
#    -asequence pep-align/BSNT_03439___resE.1.24716.seq
#    -bsequence pep-align/BPUM_2044___resE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03439___resE-BPUM_2044___resE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03439___resE-BPUM_2044___resE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03439___resE
# 2: BPUM_2044___resE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 593
# Identity:     462/593 (77.9%)
# Similarity:   513/593 (86.5%)
# Gaps:           4/593 ( 0.7%)
# Score: 2338.0
# 
#
#=======================================

BSNT_03439___      1 MKFWKSVVGKLWFTILSLVLIVLFILTVLLLEFIENYHVEEAENDLTQLA     50
                     ||.|||||||||.|||.||||||.||||||||||||||||||::||||:|
BPUM_2044___r      1 MKLWKSVVGKLWLTILFLVLIVLSILTVLLLEFIENYHVEEAKSDLTQMA     50

BSNT_03439___     51 NKVAVILENHEDQALARSITWELADNLTSIAIIQDEKNHWYSPNDKNRLS    100
                     ||||||||:|:||:||||||.||||.||||||||::...|||.....:|.
BPUM_2044___r     51 NKVAVILESHDDQSLARSITSELADKLTSIAIIQEDGLEWYSSEKDGKLP    100

BSNT_03439___    101 SITVEQIQHDKDLNKALQDHKKVSKRTGLSDTDTDNERLIVGVPYEKDGK    150
                     :||.:||:.|.|||:||:|.||:|||...:..:..:||::||||:|.:||
BPUM_2044___r    101 AITKKQIEADSDLNQALKDRKKISKRAEPNAGNHKDERIVVGVPFEANGK    150

BSNT_03439___    151 KGMVFLSQSLLAVKDTTKHTTRYIFLAAGIAIVLTTFFAFFLSSRVTYPL    200
                     |||||||||||||:.|||||||||||||||||||||.||||||:||||||
BPUM_2044___r    151 KGMVFLSQSLLAVEQTTKHTTRYIFLAAGIAIVLTTIFAFFLSTRVTYPL    200

BSNT_03439___    201 RKMREGAQDLAKGKFDTKIPILTQDEIGELATAFNQMGRQLNFHINALNQ    250
                     |||:|||||||||||||||||||||||||||.||||||:||.|||.||||
BPUM_2044___r    201 RKMKEGAQDLAKGKFDTKIPILTQDEIGELAIAFNQMGKQLTFHITALNQ    250

BSNT_03439___    251 EKEQLSNILSSMADGVITINIDGTILVTNPPAERFLQAWYYEQNMNIKEG    300
                     |||.||||||||||||||||||||||:||||||||||||||||||.||:|
BPUM_2044___r    251 EKEHLSNILSSMADGVITINIDGTILMTNPPAERFLQAWYYEQNMKIKDG    300

BSNT_03439___    301 DNLPPEAKELFQNAVSTEKEQMIEMTLQGRSWVLLMSPLYAESHVRGAVA    350
                     |.|||||:|||..|||||||||||:|||||:|||||||||.:..||||||
BPUM_2044___r    301 DELPPEARELFHTAVSTEKEQMIEVTLQGRTWVLLMSPLYNQQDVRGAVA    350

BSNT_03439___    351 VLRDMTEERRLDKLREDFIANVSHELRTPISMLQGYSEAIVDDIASSEED    400
                     |||||||||||||||:||||||||||||||:|||||||||:||||.|||:
BPUM_2044___r    351 VLRDMTEERRLDKLRKDFIANVSHELRTPIAMLQGYSEAIIDDIAGSEEE    400

BSNT_03439___    401 RKEIAQIIYDESLRMGRLVNDLLDLARMESGHTGLHYEKINVNEFLEKII    450
                     :||||||||||||||||||||||||||||:||..|:.|..:..|..|||.
BPUM_2044___r    401 KKEIAQIIYDESLRMGRLVNDLLDLARMEAGHITLNLESTDTEELTEKIY    450

BSNT_03439___    451 RKFSGVAKEKNIALQNDISLTEEEFMLDEDKMEQVFTNLIDNALRHTSSG    500
                     |||.|:||||.:.|..||.:.|..|:||.||||||||||||||:|||..|
BPUM_2044___r    451 RKFLGIAKEKQVDLTYDIQVDEPHFVLDPDKMEQVFTNLIDNAIRHTPEG    500

BSNT_03439___    501 GSVSISVHSVKDGLKIDIKDSGSGIPEEDLPFIFERFYKADKARTRGRAG    550
                     |.|..||.||:.|||:|:||||||||||||||||||||||||||||||:|
BPUM_2044___r    501 GEVHFSVQSVESGLKMDVKDSGSGIPEEDLPFIFERFYKADKARTRGRSG    550

BSNT_03439___    551 TGLGLAIVKNIVEAHNGSITVHSRIDKGTTFTFYIPTKR----    589
                     |||||||||||||||.|||..||:...||.||||||.|:    
BPUM_2044___r    551 TGLGLAIVKNIVEAHQGSIHAHSKAGTGTHFTFYIPRKKQELV    593


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