Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03426 and BPUM_2035
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_03426___recQ.1.24716.seq
# -bsequence pep-align/BPUM_2035___recQ.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03426___recQ-BPUM_2035___recQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03426___recQ-BPUM_2035___recQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03426___recQ
# 2: BPUM_2035___recQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity: 274/508 (53.9%)
# Similarity: 360/508 (70.9%)
# Gaps: 18/508 ( 3.5%)
# Score: 1369.0
#
#
#=======================================
BSNT_03426___ 1 MTKLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQL 50
|.||.|||.::||..:||.||:|||.|:|..|||:||||||||||||||:
BPUM_2035___r 1 MDKLHQTLMRYFGHGTFKSGQEDIIRSVLHQKDTVAMLPTGGGKSLCYQI 50
BSNT_03426___ 51 PGYMLDGMVLIVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVL 100
||||.||:|||:|||||||||||:::|.|||||.|||||.|..|||:.::
BPUM_2035___r 51 PGYMTDGLVLIISPLLSLMEDQVERMKMRGEKRVAALNSTLTFQERRHII 100
BSNT_03426___ 101 EHIHRYKFLYLSPEALQSPYVLEKLKSVPISLFVIDEAHCISEWGHDFRP 150
.|:..||||:::||||.|..:||:|||:.|.|||:|||||||||||||||
BPUM_2035___r 101 RHLPSYKFLFVAPEALMSEMLLEQLKSMRIGLFVVDEAHCISEWGHDFRP 150
BSNT_03426___ 151 DYSKLGQLRKKLGHPPVLALTATATKETLQDVMNLLELQHAVRHLNSVNR 200
:|||||:.|:.||||..|||||||||:||:|.:..|.||....|::||||
BPUM_2035___r 151 EYSKLGEWREALGHPVALALTATATKQTLKDTVQTLRLQQPDFHIHSVNR 200
BSNT_03426___ 201 PNIALRVENAVDTAE-KIDRVIQLVENLQGPGIVYCPTRKWAEELAGEIK 249
||||| |:...:|.| |..|.|:||:.||||||:|||||:..||||..:|
BPUM_2035___r 201 PNIAL-VKEVHETKEAKEKRAIELVDFLQGPGIIYCPTRQMTEELALYMK 249
BSNT_03426___ 250 SKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIR 299
.||:.|.:|||||:::|||:|||||||.:|||:||||:|||||:||.:||
BPUM_2035___r 250 QKTNQRVEFYHGGMDAGDRMLIQQQFISDQLDLICCTSAFGMGIDKANIR 299
BSNT_03426___ 300 YVIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMES 349
:|||...||:.|||||||||||||||.||||||....|.|:|:.:||.:.
BPUM_2035___r 300 FVIHMSPPQSIEAFMQEIGRAGRDGKNSVSILLYTEEDAEIQQHLIQADG 349
BSNT_03426___ 350 VTAEEIADVIRVLEKTEERDERRLRDVLLQYGVGETQARMMIHLFM---- 395
....||...:..|.:.:..||::||:.|::.|:.||:|||:.|.:|
BPUM_2035___r 350 FDDPEIDFYLAQLTQMQINDEKKLRERLMETGLQETRARMLTHYYMMHES 399
BSNT_03426___ 396 -QGKTSVELMKKEISYRMELKLEKMHRVSFLLQRDGCLRQALLTYFDESY 444
|....::.:|:::..|...||.|:.:....:....|.||:||:||.|..
BPUM_2035___r 400 EQRPAILKNLKEKLQDRQTEKLRKVWQFKERIMDHNCFRQSLLSYFHEQI 449
BSNT_03426___ 445 E------PDDGNLPCCSHCGFDLSLYELKGARSKMAPLDSWSSELHRIFS 488
: .|| |||.||.:||.||.|....::..:..|.:.|.|:|.
BPUM_2035___r 450 DQTERASSDD----CCSSCGLNLSDYEKKEQSLELNEMKHWKTVLDRMFH 495
BSNT_03426___ 489 LQTVGELN 496
|....:.
BPUM_2035___r 496 LTKEAQH- 502
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