Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03426 and BPUM_2035

See DNA alignment / Visit BSNT_03426 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_03426___recQ.1.24716.seq
#    -bsequence pep-align/BPUM_2035___recQ.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03426___recQ-BPUM_2035___recQ.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03426___recQ-BPUM_2035___recQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03426___recQ
# 2: BPUM_2035___recQ
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity:     274/508 (53.9%)
# Similarity:   360/508 (70.9%)
# Gaps:          18/508 ( 3.5%)
# Score: 1369.0
# 
#
#=======================================

BSNT_03426___      1 MTKLQQTLYQFFGFTSFKKGQQDIIESILSGKDTIAMLPTGGGKSLCYQL     50
                     |.||.|||.::||..:||.||:|||.|:|..|||:||||||||||||||:
BPUM_2035___r      1 MDKLHQTLMRYFGHGTFKSGQEDIIRSVLHQKDTVAMLPTGGGKSLCYQI     50

BSNT_03426___     51 PGYMLDGMVLIVSPLLSLMEDQVQQLKARGEKRAAALNSMLNRQERQFVL    100
                     ||||.||:|||:|||||||||||:::|.|||||.|||||.|..|||:.::
BPUM_2035___r     51 PGYMTDGLVLIISPLLSLMEDQVERMKMRGEKRVAALNSTLTFQERRHII    100

BSNT_03426___    101 EHIHRYKFLYLSPEALQSPYVLEKLKSVPISLFVIDEAHCISEWGHDFRP    150
                     .|:..||||:::||||.|..:||:|||:.|.|||:|||||||||||||||
BPUM_2035___r    101 RHLPSYKFLFVAPEALMSEMLLEQLKSMRIGLFVVDEAHCISEWGHDFRP    150

BSNT_03426___    151 DYSKLGQLRKKLGHPPVLALTATATKETLQDVMNLLELQHAVRHLNSVNR    200
                     :|||||:.|:.||||..|||||||||:||:|.:..|.||....|::||||
BPUM_2035___r    151 EYSKLGEWREALGHPVALALTATATKQTLKDTVQTLRLQQPDFHIHSVNR    200

BSNT_03426___    201 PNIALRVENAVDTAE-KIDRVIQLVENLQGPGIVYCPTRKWAEELAGEIK    249
                     ||||| |:...:|.| |..|.|:||:.||||||:|||||:..||||..:|
BPUM_2035___r    201 PNIAL-VKEVHETKEAKEKRAIELVDFLQGPGIIYCPTRQMTEELALYMK    249

BSNT_03426___    250 SKTSSRADFYHGGLESGDRILIQQQFIHNQLDVICCTNAFGMGVDKPDIR    299
                     .||:.|.:|||||:::|||:|||||||.:|||:||||:|||||:||.:||
BPUM_2035___r    250 QKTNQRVEFYHGGMDAGDRMLIQQQFISDQLDLICCTSAFGMGIDKANIR    299

BSNT_03426___    300 YVIHFHLPQTAEAFMQEIGRAGRDGKPSVSILLRAPGDFELQEQIIQMES    349
                     :|||...||:.|||||||||||||||.||||||....|.|:|:.:||.:.
BPUM_2035___r    300 FVIHMSPPQSIEAFMQEIGRAGRDGKNSVSILLYTEEDAEIQQHLIQADG    349

BSNT_03426___    350 VTAEEIADVIRVLEKTEERDERRLRDVLLQYGVGETQARMMIHLFM----    395
                     ....||...:..|.:.:..||::||:.|::.|:.||:|||:.|.:|    
BPUM_2035___r    350 FDDPEIDFYLAQLTQMQINDEKKLRERLMETGLQETRARMLTHYYMMHES    399

BSNT_03426___    396 -QGKTSVELMKKEISYRMELKLEKMHRVSFLLQRDGCLRQALLTYFDESY    444
                      |....::.:|:::..|...||.|:.:....:....|.||:||:||.|..
BPUM_2035___r    400 EQRPAILKNLKEKLQDRQTEKLRKVWQFKERIMDHNCFRQSLLSYFHEQI    449

BSNT_03426___    445 E------PDDGNLPCCSHCGFDLSLYELKGARSKMAPLDSWSSELHRIFS    488
                     :      .||    |||.||.:||.||.|....::..:..|.:.|.|:|.
BPUM_2035___r    450 DQTERASSDD----CCSSCGLNLSDYEKKEQSLELNEMKHWKTVLDRMFH    495

BSNT_03426___    489 LQTVGELN    496
                     |....:. 
BPUM_2035___r    496 LTKEAQH-    502


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