Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03425 and BPUM_2034
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_03425___ypbD.1.24716.seq
# -bsequence pep-align/BPUM_2034___ypbD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03425___ypbD-BPUM_2034___ypbD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03425___ypbD-BPUM_2034___ypbD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03425___ypbD
# 2: BPUM_2034___ypbD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 213
# Identity: 112/213 (52.6%)
# Similarity: 150/213 (70.4%)
# Gaps: 13/213 ( 6.1%)
# Score: 612.0
#
#
#=======================================
BSNT_03425___ 1 -----------MTDRDMLKQLYLTQLLIIFAAAAAGLFFFEDVRDVLKLW 39
:|||.:::|||.||||::..:...|:|.|....|...||
BPUM_2034___y 1 MIEQHRRIIEKLTDRQVVEQLYFTQLLMLIVSFLLGIFMFNQWTDFTSLW 50
BSNT_03425___ 40 DIRDMRIIWYGVSIAVIVILADMAVMKWFPSHLYDDGGINKKIFSKRSIP 89
.|.||||:.:|:..|::||:.|..|||.||:|:|||||:|:|:|..||||
BPUM_2034___y 51 QIHDMRILTHGIGGALLVIIVDAIVMKVFPAHMYDDGGLNEKMFKNRSIP 100
BSNT_03425___ 90 HIIFLTLLIAFAEEMLFRGVLQTHIGLWAASLIFAALHFRYLSKWLLFIM 139
||::|||||||:||:||||::|...||..||::||.||||||||.||||:
BPUM_2034___y 101 HIVWLTLLIAFSEEILFRGIVQQQFGLEIASIVFALLHFRYLSKILLFIL 150
BSNT_03425___ 140 VTAISFLLGLMYEWTGNLFVPMTAHFIIDAVFACQIRFEHVRRDKHDEHV 189
|.:||..|||:||||||||||:..||:||.|||||||.::..||:|..:|
BPUM_2034___y 151 VVSISIFLGLLYEWTGNLFVPVMTHFVIDLVFACQIRLKYKGRDEHGRNV 200
BSNT_03425___ 190 ESREKKSPESL-- 200
|:.||:.....
BPUM_2034___y 201 ENAEKEGATHQQP 213
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