Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03423 and BPUM_2032

See DNA alignment / Visit BSNT_03423 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_03423___ypbF.1.24716.seq
#    -bsequence pep-align/BPUM_2032___ypbF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03423___ypbF-BPUM_2032___ypbF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03423___ypbF-BPUM_2032___ypbF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03423___ypbF
# 2: BPUM_2032___ypbF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 152
# Identity:      53/152 (34.9%)
# Similarity:    85/152 (55.9%)
# Gaps:          27/152 (17.8%)
# Score: 276.0
# 
#
#=======================================

BSNT_03423___      1 MESLWNQLDQFTDAPTKQMLQALVKRKQKFENYAAQCRRWRWASLICLGL     50
                       ...:.:.::.|.||::|::.|:|||.|:|.:|.||:||:|.:|:.|.:
BPUM_2032___y      1 --MTLHAISRYMDQPTQKMMETLIKRKLKYEGFAKQCKRWQWTALLSLAI     48

BSNT_03423___     51 LC---VMIMSK--SPEPQLILQEILSHTFYLFWMLATAFAYCTSYYFKKK     95
                     |.   |:..:|  |.:|:.::..:|.|..:|||::|..||:..|||:|||
BPUM_2032___y     49 LLFYFVITANKGGSLQPEAMIATLLGHEVFLFWIMAEVFAFYASYYYKKK     98

BSNT_03423___     96 EEKSETDFHKLRCEIIQKSTDLWPQPDKWKARESVFHMMKHKYDINLYFE    145
                     |||:|.::|:||||||.|...|      ..|..||...            
BPUM_2032___y     99 EEKAEDEYHRLRCEIITKKHRL------MAAIRSVERA------------    130

BSNT_03423___    146 SK    147
                       
BPUM_2032___y    130 --    130


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