Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03421 and BPUM_2031

See DNA alignment / Visit BSNT_03421 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence pep-align/BSNT_03421___ypbG.1.24716.seq
#    -bsequence pep-align/BPUM_2031___ypbG.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03421___ypbG-BPUM_2031___ypbG.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03421___ypbG-BPUM_2031___ypbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03421___ypbG
# 2: BPUM_2031___ypbG
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity:     135/265 (50.9%)
# Similarity:   177/265 (66.8%)
# Gaps:           9/265 ( 3.4%)
# Score: 696.0
# 
#
#=======================================

BSNT_03421___      1 MKLSV----KIAGVLTVAAAAMTAKMYATAKGNHLKTHTFPLSKMKGKPP     46
                     ||.::    .||.|.|  ...:||||..|||.|::|.|.|.:..::...|
BPUM_2031___y      1 MKYAIGFTAAIAAVTT--GVCVTAKMVKTAKQNNIKKHYFTIEALQSDRP     48

BSNT_03421___     47 LTIFFISDIHKRLIDQDLLEKARSHAPHLVIIGGDLAEGGVPSARIEENI     96
                     ..||||||.|:|||...||.:.....|.:::|||||||.|||.||||||:
BPUM_2031___y     49 AVIFFISDTHRRLIHDSLLAEVTQEKPDVIMIGGDLAEKGVPYARIEENV     98

BSNT_03421___     97 KRLVHFGVPIVFVWGNNDYEVRQHKLYSIFKAHGIITLRNESVPFSYNGH    146
                     |||... .|:.|||||||:|:.|.|...|..|..:.||:||:..:.:.|.
BPUM_2031___y     99 KRLSRI-APVYFVWGNNDHELHQQKFKGILHAFDVTTLQNETAVWDFEGQ    147

BSNT_03421___    147 TIAIAGVDDIRMEMDHYEEAIKELDESQLNILVCHNPEIHEQINEDDGID    196
                     .|.|.|:||||:|...||....|..:..:|||:.|||::|..::||:||:
BPUM_2031___y    148 PIKIGGIDDIRLEKADYEAIRPEFVKGDVNILLSHNPDVHHLMSEDEGIN    197

BSNT_03421___    197 VILSGHTHGGQIRFGKFGPYELGKTGIVKNAAYLISNGYGTTKVPLRLGA    246
                     ::|||||||||||.|||||||.|:||.||.|.:||||||||||:|:||||
BPUM_2031___y    198 LVLSGHTHGGQIRIGKFGPYEKGRTGQVKGAFFLISNGYGTTKIPMRLGA    247

BSNT_03421___    247 EPETHIVTLCGPE--    259
                     |||||::.|...:  
BPUM_2031___y    248 EPETHLIYLMPVKKR    262


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