Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03420 and BPUM_2030
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_03420___ypbH.1.24716.seq
# -bsequence pep-align/BPUM_2030___ypbH.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03420___ypbH-BPUM_2030___ypbH.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03420___ypbH-BPUM_2030___ypbH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03420___ypbH
# 2: BPUM_2030___ypbH
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 194
# Identity: 150/194 (77.3%)
# Similarity: 176/194 (90.7%)
# Gaps: 1/194 ( 0.5%)
# Score: 795.0
#
#
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BSNT_03420___ 1 MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVHQLFKDMMNEANT 50
|||||||||||||||||||||||||||||||||||||||||||||||||.
BPUM_2030___y 1 MRLERLNYNKIKIFLTLDDLTDRGLTKEDLWKDSFKVHQLFKDMMNEANQ 50
BSNT_03420___ 51 ELGFEANGPIAVEVYSLQAQGMVVIVTKNQDADSEDDEYDDDYIEMQVKL 100
||||||:|||||||:|||||||||||||:|..|::|||:|:|||||||||
BPUM_2030___y 51 ELGFEASGPIAVEVFSLQAQGMVVIVTKSQQDDADDDEFDEDYIEMQVKL 100
BSNT_03420___ 101 DESADIIYQFHSFEDIIQLSESLQRIGITGGTVYHYDGQYFLSLEDLGSH 150
|||..::|||.||||:||||.||.|||:.|||||||:|||||||:|....
BPUM_2030___y 101 DESHHVLYQFASFEDVIQLSHSLNRIGLLGGTVYHYEGQYFLSLDDFEEL 150
BSNT_03420___ 151 TAEGVVAVLAEYGNPTTLTIYRLQEYGKLIMDGNAVETIQTHFS 194
:|:.|:::|||:|:||||||:||:||||:||..:||:|||.:|
BPUM_2030___y 151 SADTVISILAEFGSPTTLTIHRLKEYGKVIMQDDAVKTIQMYF- 193
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