Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03416 and BPUM_2028
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_03416___ypdA.1.24716.seq
# -bsequence pep-align/BPUM_2028___ypdA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03416___ypdA-BPUM_2028___ypdA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03416___ypdA-BPUM_2028___ypdA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03416___ypdA
# 2: BPUM_2028___ypdA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity: 255/324 (78.7%)
# Similarity: 288/324 (88.9%)
# Gaps: 1/324 ( 0.3%)
# Score: 1334.0
#
#
#=======================================
BSNT_03416___ 1 MIQEKAIIIGGGPCGLSAAIHLKEIGIDALVIEKGNVVNSIYNYPTHQTF 50
|.||||||||||||||||||..|:||||||||||||||||||:|||||||
BPUM_2028___y 1 MKQEKAIIIGGGPCGLSAAIAFKQIGIDALVIEKGNVVNSIYHYPTHQTF 50
BSNT_03416___ 51 FSSSEKLEIGDVAFITENRKPVRIQALSYYREVVKRKNIRVNAFEMVHKV 100
||||||||||||||||||||||||||||||||||:||::||:|||.|:.|
BPUM_2028___y 51 FSSSEKLEIGDVAFITENRKPVRIQALSYYREVVRRKSLRVHAFEKVNAV 100
BSNT_03416___ 101 TKTENNTFVIETSKETYKTPYCIIATGYYDHPNYMNVPGENLPKVFHYFK 150
||.:.: |.:.|||:.|...|.:||||||||||||||.||:||.|:||||
BPUM_2028___y 101 TKKDGH-FTVSTSKDDYVCDYVVIATGYYDHPNYMNVKGEDLPHVYHYFK 149
BSNT_03416___ 151 EGHPYFDKDVVVIGGKNSSVDAALELVKSGARVTVLYRGNEYSPSIKPWI 200
||||||||||.|||||||||||||||||.|:||||||||.|||.||||||
BPUM_2028___y 150 EGHPYFDKDVTVIGGKNSSVDAALELVKCGSRVTVLYRGTEYSSSIKPWI 199
BSNT_03416___ 201 LPEFEALVRNGTIRMEFGACVEKITEDEVVYRSGEKELITIKNDFVFAMT 250
|||||||||||||||||||.|::|||:||::.:.:::...:|:|:|||||
BPUM_2028___y 200 LPEFEALVRNGTIRMEFGAQVQEITEEEVIFTNQQEQTERVKSDYVFAMT 249
BSNT_03416___ 251 GYHPDHQFLEKIGVEIDKETGRPYFNEETMETNVEGVFIAGVIAAGNNAN 300
||||||.||||:||.||:|:|||.|:|:||||||||:|||||||||||||
BPUM_2028___y 250 GYHPDHSFLEKMGVTIDQESGRPAFDEQTMETNVEGIFIAGVIAAGNNAN 299
BSNT_03416___ 301 EIFIENGRFHGGHIAAEIAKRENH 324
||||||||||||.||.||..|.|.
BPUM_2028___y 300 EIFIENGRFHGGLIAEEINNRMNG 323
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