Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03414 and BPUM_2027
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:56
# Commandline: needle
# -asequence pep-align/BSNT_03414___ypdC.1.24716.seq
# -bsequence pep-align/BPUM_2027___ypdC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03414___ypdC-BPUM_2027___ypdC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03414___ypdC-BPUM_2027___ypdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03414___ypdC
# 2: BPUM_2027___ypdC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 218
# Identity: 168/218 (77.1%)
# Similarity: 189/218 (86.7%)
# Gaps: 0/218 ( 0.0%)
# Score: 909.0
#
#
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BSNT_03414___ 1 MFAIISAGIAPGIALLSYFYLKDQYDNEPVHMVLRSFFLGVVLVFPIMFI 50
|.||||||:||||||||||||||||||||||||:|||.|||:||||.|||
BPUM_2027___y 1 MIAIISAGLAPGIALLSYFYLKDQYDNEPVHMVIRSFMLGVILVFPTMFI 50
BSNT_03414___ 51 QYVLEKENVGGGSFFVSFLSSGFLEESLKWFILMISVYPHAHFDEHYDGI 100
||||::|::......:||::||||||||||||||:|||.||.||||||||
BPUM_2027___y 51 QYVLQEEHITTNPILISFVTSGFLEESLKWFILMVSVYAHAQFDEHYDGI 100
BSNT_03414___ 101 VYGTSVSLGFATLENILYLIGHGVEHAFVRALLPVSCHALIGVIMGFYLG 150
|||||||||||||||||||:|||||:||.|||||||.|||.||:||||:|
BPUM_2027___y 101 VYGTSVSLGFATLENILYLVGHGVEYAFTRALLPVSSHALFGVVMGFYIG 150
BSNT_03414___ 151 KARFSADKARVKWLTLSLVVPSLLHGSYDFILTALSNWIYYMLPFMVFLW 200
|||||..|.:.|||.|||.:|.|.||.|||||..:.||.|.|||||:|||
BPUM_2027___y 151 KARFSEKKEQRKWLILSLTLPVLFHGLYDFILLGMKNWGYIMLPFMIFLW 200
BSNT_03414___ 201 WFGLRKAKKARSVNMMQV 218
|||||||||||||.|:|:
BPUM_2027___y 201 WFGLRKAKKARSVKMVQI 218
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