Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03398 and BPUM_2017

See DNA alignment / Visit BSNT_03398 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:55
# Commandline: needle
#    -asequence pep-align/BSNT_03398___seaA.1.24716.seq
#    -bsequence pep-align/BPUM_2017___seaA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03398___seaA-BPUM_2017___seaA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03398___seaA-BPUM_2017___seaA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03398___seaA
# 2: BPUM_2017___seaA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 297
# Identity:     218/297 (73.4%)
# Similarity:   257/297 (86.5%)
# Gaps:           3/297 ( 1.0%)
# Score: 1139.0
# 
#
#=======================================

BSNT_03398___      1 MSDYIYPIIAGVIAGIATRLYMLKTDYRQYPTYVHGKVIHIALGLIAAGL     50
                     |:||.:|:|.|||.|:|.|||||:|||||||||:||:|||||||.||:||
BPUM_2017___s      1 MTDYTFPVIIGVIFGMAARLYMLRTDYRQYPTYIHGQVIHIALGFIASGL     50

BSNT_03398___     51 GAIIMPALLQEEFTAITFLTLAATQFRDVRNMERNTLTQMDSYELVSRGS    100
                     ||||||||:|||||||||||||||||||||||||||||||||||||||||
BPUM_2017___s     51 GAIIMPALIQEEFTAITFLTLAATQFRDVRNMERNTLTQMDSYELVSRGS    100

BSNT_03398___    101 TYIEGIAIAFESRNYIVIFTALLTTSAYVFLSIWAAVIAAVVCFLLAMKF    150
                     ||||||||||||||||.|.|||:||:|.:|.|:....:..::||.||...
BPUM_2017___s    101 TYIEGIAIAFESRNYIAILTALITTTACIFFSLIIGTVVGILCFFLAKLL    150

BSNT_03398___    151 MSGSVLKDIVDIEYIKPRFDGPGLFVDNIYMMNIGLPEKQELILKHGMGF    200
                     ||||.|||||:|:..:.||||.||:|::||:|||||||||:|||:|||||
BPUM_2017___s    151 MSGSQLKDIVNIQKGELRFDGAGLYVNDIYIMNIGLPEKQKLILEHGMGF    200

BSNT_03398___    201 ILTPKNFNSAATIANLGQRQAILFDVSNVLGVYRDSGEPSLTPIAKRDLN    250
                     :|||||||:|.||||||||||||||:|||||||||||||||.|:||||||
BPUM_2017___s    201 VLTPKNFNAATTIANLGQRQAILFDLSNVLGVYRDSGEPSLCPLAKRDLN    250

BSNT_03398___    251 DGRVAVFVLPQIHHPETAVQIISNVPTLENAIRMPTEFIKNQDKVIG    297
                     :|.:.||:|||.:..:.||:::..||.|||||||||||||.:.:   
BPUM_2017___s    251 NGTLGVFILPQWYREDLAVRVLEEVPILENAIRMPTEFIKKKVR---    294


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