Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03398 and BPUM_2017
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:55
# Commandline: needle
# -asequence dna-align/BSNT_03398___seaA.1.24716.seq
# -bsequence dna-align/BPUM_2017___seaA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03398___seaA-BPUM_2017___seaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03398___seaA-BPUM_2017___seaA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03398___seaA
# 2: BPUM_2017___seaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 927
# Identity: 639/927 (68.9%)
# Similarity: 639/927 (68.9%)
# Gaps: 75/927 ( 8.1%)
# Score: 2129.0
#
#
#=======================================
BSNT_03398___ 1 ATGAGTGATTACATCTATCC---GATTATTGCTGGGGTCATTGCCGGAAT 47
||||..|||||.|..|.||| |||||| |||.|||||....||.||
BPUM_2017___s 1 ATGACGGATTATACGTTTCCTGTGATTAT---TGGTGTCATCTTTGGGAT 47
BSNT_03398___ 48 TGCGACAAGGCTTTATATGCTGAAAACGGATTACCGCCAGTATCCGACCT 97
.|||.||||||||||||||.|.|.|||.||||||||.||.|||||.||.|
BPUM_2017___s 48 GGCGGCAAGGCTTTATATGTTAAGAACAGATTACCGGCAATATCCTACGT 97
BSNT_03398___ 98 ATGTTCATGGGAAAGTGATTCACATCGCACTGGGGTTGATAGCGGCTGGT 147
||.|||||||..||||.||||||||.||.||.||.||.||.||..|.||.
BPUM_2017___s 98 ATATTCATGGACAAGTAATTCACATTGCGCTTGGTTTTATCGCTTCAGGA 147
BSNT_03398___ 148 TTAGGTGCAATTATTATGCCGGCGCTTTTGCAGGAGGAATTTACGGCCAT 197
.|.|||||.||.||||||||.||.||..|.|||||||||||||||||.||
BPUM_2017___s 148 CTTGGTGCGATCATTATGCCTGCACTCATTCAGGAGGAATTTACGGCGAT 197
BSNT_03398___ 198 CACATTTTTAACATTGGCAGCGACGCAATTTAGAGATGTCCGAAACATGG 247
.||.|||.|.|||.||||.||.||||||||..||||||||||.||.||||
BPUM_2017___s 198 TACGTTTCTCACACTGGCGGCCACGCAATTCCGAGATGTCCGCAATATGG 247
BSNT_03398___ 248 AGCGGAACACATTGACGCAAATGGATTCGTATGAACTTGTCTCAAGGGGA 297
|..|.||.||.||.||.||.||||||||.|||||.||.||.|||||.||.
BPUM_2017___s 248 AAAGAAATACGTTAACTCAGATGGATTCATATGAGCTAGTATCAAGAGGT 297
BSNT_03398___ 298 AGCACATATATTGAGGGGATTGCCATTGCGTTTGAAAGCAGAAATTATAT 347
||.||||||||.||.||.|||||||||||.||||||||..||||||||||
BPUM_2017___s 298 AGTACATATATAGAAGGCATTGCCATTGCCTTTGAAAGTCGAAATTATAT 347
BSNT_03398___ 348 TGTGATCTTTACAGCGCTTTTGACAACCTCTGCGTATGTGTTTTTATCCA 397
||.|||..|.||.|||||..|.||.|||.|.||.|...|.||.||.||..
BPUM_2017___s 348 TGCGATTCTCACGGCGCTGATTACGACCACAGCTTGCATTTTCTTCTCGC 397
BSNT_03398___ 398 TC-----TGGGCTGCTGTCATAGCGGCTGTCG------TTTGTTTTTTAC 436
|| |||| |.||.| |||| ||||||||||..
BPUM_2017___s 398 TCATTATTGGG--------ACAGTG---GTCGGTATTCTTTGTTTTTTCT 436
BSNT_03398___ 437 TGGCTATGAAGTTTATGTCGGGCAGTGTGTTGAAGGATATTGTAGATATC 486
||||.|.|...||.|||||.||||||...||.|||||||||||..|.|
BPUM_2017___s 437 TGGCAAAGCTATTAATGTCTGGCAGTCAATTAAAGGATATTGTCAACA-- 484
BSNT_03398___ 487 GAGTACATAA-----AGCCGCGCTTTGACGGTCCGGGACTGTTTGTTGAT 531
||||.|| |||..||||||||.||..|.||.||.|.|||..||
BPUM_2017___s 485 ---TACAAAAAGGAGAGCTCCGCTTTGATGGGGCAGGGCTTTATGTGAAT 531
BSNT_03398___ 532 AATATTTATATGATGAATATCGGGCTTCCAGAGAAACAGGAACTGATTTT 581
.|||||||.||.|||||||||||.||.||.||.||.||..|.||.|||||
BPUM_2017___s 532 GATATTTACATCATGAATATCGGACTGCCCGAAAAGCAAAAGCTCATTTT 581
BSNT_03398___ 582 AAAGCATGGCATGGGCTTTATTTTGACGCCGAAAAACTTTAATTCAGCAG 631
|.|||||||.|||||.|||.|||||||.||||||||.||.||..||||..
BPUM_2017___s 582 AGAGCATGGGATGGGTTTTGTTTTGACACCGAAAAATTTCAACGCAGCCA 631
BSNT_03398___ 632 CGACGATAGCAAATTTAGGGCAGCGTCAGGCCATTTTATTTGATGTTTCC 681
|.||.||.||.||..|.||||||||.||.|||||.|||||||||.|.|||
BPUM_2017___s 632 CAACAATTGCTAACCTTGGGCAGCGGCAAGCCATCTTATTTGATTTATCC 681
BSNT_03398___ 682 AATGTGCTCGGGGTTTATCGGGATTCAGGAGAACCAT--CTTTGACACCA 729
|||||.||.||.||.|||||.||.||.||.|||||.| ||.|| .||.
BPUM_2017___s 682 AATGTACTTGGTGTGTATCGCGACTCTGGTGAACCTTCGCTCTG--TCCG 729
BSNT_03398___ 730 ATTGCAAAACGGGATTTAAATGATGGGAGAGTGGCAGTATTTGTTCTTCC 779
.|.||||||||.|||.|||||.|.||.|.|.|.|..||.||..||.|.||
BPUM_2017___s 730 CTCGCAAAACGAGATCTAAATAACGGCACACTTGGTGTGTTCATTTTACC 779
BSNT_03398___ 780 GCAA----AT--TCACCATCCCGAAACGGCTGTTCAAAT-TATTAGCA-A 821
|||| || |.|..||| .||||||.| .| ||||||.| |
BPUM_2017___s 780 GCAATGGTATCGTGAAGATC------TGGCTGTCC--GTGTATTAGAAGA 821
BSNT_03398___ 822 TGTTCCAACCC----TGGAAAATGCGATTAGAATGCCGACTGAATTTATC 867
.|| |||| |.||||||||.||.|||||||||||.||.||.||.
BPUM_2017___s 822 AGT----ACCCATTTTAGAAAATGCCATCAGAATGCCGACAGAGTTCATA 867
BSNT_03398___ 868 AAGAATCAGGATAAGGTGATAGGATGA 894
||.||..|.| |.||||.|
BPUM_2017___s 868 AAAAAGAAAG-TGAGGTAA-------- 885
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