Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_03393 and BPUM_2013

See DNA alignment / Visit BSNT_03393 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_03393___yphE.1.24716.seq
#    -bsequence pep-align/BPUM_2013___yphE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03393___yphE-BPUM_2013___yphE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03393___yphE-BPUM_2013___yphE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03393___yphE
# 2: BPUM_2013___yphE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 67
# Identity:      51/67 (76.1%)
# Similarity:    59/67 (88.1%)
# Gaps:           0/67 ( 0.0%)
# Score: 257.0
# 
#
#=======================================

BSNT_03393___      1 MNLALMKMWFALGSMGLMFLAVASIYLSRFKCQNRFLKITISSFAYMCML     50
                     |:.||:||||||||||||||||.:||.||||.::||||||.|:.||..||
BPUM_2013___y      1 MSFALIKMWFALGSMGLMFLAVVTIYFSRFKLKSRFLKITASTVAYSLML     50

BSNT_03393___     51 ISGIIVFVVVFSGPVNE     67
                     :||||||:|||||||||
BPUM_2013___y     51 MSGIIVFLVVFSGPVNE     67


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.