Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03393 and BPUM_2013

See Amino acid alignment / Visit BSNT_03393 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence dna-align/BSNT_03393___yphE.1.24716.seq
#    -bsequence dna-align/BPUM_2013___yphE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03393___yphE-BPUM_2013___yphE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03393___yphE-BPUM_2013___yphE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03393___yphE
# 2: BPUM_2013___yphE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity:     153/207 (73.9%)
# Similarity:   153/207 (73.9%)
# Gaps:           6/207 ( 2.9%)
# Score: 522.5
# 
#
#=======================================

BSNT_03393___      1 TTGAATCTGGCATTGATGAAAATGTGGTTTGCACTAGGGTCCATGGGTCT     50
                     .|||.|.|.||.||.||.||.||||||||||||||.||.||.|||||.||
BPUM_2013___y      1 ATGAGTTTTGCTTTAATCAAGATGTGGTTTGCACTTGGTTCAATGGGGCT     50

BSNT_03393___     51 GATGTTTCTGGCTGTAGCTTCCATCTATTTAAGCCGCTTTAAG-TGCCAA     99
                     .||||||.|.|||||||...||||.|||||.||.||.|||||| ||  ||
BPUM_2013___y     51 CATGTTTTTAGCTGTAGTAACCATTTATTTCAGTCGATTTAAGCTG--AA     98

BSNT_03393___    100 -AACCGTTTTTTGAAGATTACGATTTCATCATTCGCATACATGTGT-ATG    147
                      |.|||.|||.|.||.||.||....||..|..||||||||| ||.| |||
BPUM_2013___y     99 GAGCCGGTTTCTTAAAATAACAGCCTCGACCGTCGCATACA-GTTTGATG    147

BSNT_03393___    148 CTCATATCTGGAATTATTGTGTTTGTCGTGGTTTTTAGCGGCCCTGTCAA    197
                     ||.||.||.||.||.|||||||||.|.||.||.||||||||.||.|||||
BPUM_2013___y    148 CTGATGTCAGGTATCATTGTGTTTTTAGTTGTATTTAGCGGGCCGGTCAA    197

BSNT_03393___    198 TGAATAA    204
                     |||||||
BPUM_2013___y    198 TGAATAA    204


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