Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03393 and BPUM_2013
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_03393___yphE.1.24716.seq
# -bsequence dna-align/BPUM_2013___yphE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03393___yphE-BPUM_2013___yphE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03393___yphE-BPUM_2013___yphE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03393___yphE
# 2: BPUM_2013___yphE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity: 153/207 (73.9%)
# Similarity: 153/207 (73.9%)
# Gaps: 6/207 ( 2.9%)
# Score: 522.5
#
#
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BSNT_03393___ 1 TTGAATCTGGCATTGATGAAAATGTGGTTTGCACTAGGGTCCATGGGTCT 50
.|||.|.|.||.||.||.||.||||||||||||||.||.||.|||||.||
BPUM_2013___y 1 ATGAGTTTTGCTTTAATCAAGATGTGGTTTGCACTTGGTTCAATGGGGCT 50
BSNT_03393___ 51 GATGTTTCTGGCTGTAGCTTCCATCTATTTAAGCCGCTTTAAG-TGCCAA 99
.||||||.|.|||||||...||||.|||||.||.||.|||||| || ||
BPUM_2013___y 51 CATGTTTTTAGCTGTAGTAACCATTTATTTCAGTCGATTTAAGCTG--AA 98
BSNT_03393___ 100 -AACCGTTTTTTGAAGATTACGATTTCATCATTCGCATACATGTGT-ATG 147
|.|||.|||.|.||.||.||....||..|..||||||||| ||.| |||
BPUM_2013___y 99 GAGCCGGTTTCTTAAAATAACAGCCTCGACCGTCGCATACA-GTTTGATG 147
BSNT_03393___ 148 CTCATATCTGGAATTATTGTGTTTGTCGTGGTTTTTAGCGGCCCTGTCAA 197
||.||.||.||.||.|||||||||.|.||.||.||||||||.||.|||||
BPUM_2013___y 148 CTGATGTCAGGTATCATTGTGTTTTTAGTTGTATTTAGCGGGCCGGTCAA 197
BSNT_03393___ 198 TGAATAA 204
|||||||
BPUM_2013___y 198 TGAATAA 204
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