Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03392 and BPUM_2012

See DNA alignment / Visit BSNT_03392 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_03392___yphF.1.24716.seq
#    -bsequence pep-align/BPUM_2012___yphF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03392___yphF-BPUM_2012___yphF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03392___yphF-BPUM_2012___yphF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03392___yphF
# 2: BPUM_2012___yphF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 245
# Identity:     137/245 (55.9%)
# Similarity:   183/245 (74.7%)
# Gaps:           5/245 ( 2.0%)
# Score: 734.0
# 
#
#=======================================

BSNT_03392___      1 MGKLKCAIIFAAVVFLSGCLYPNERKSSVHAIPYQDQLKQVQSAVDEFQK     50
                     |.|.|.::...|::.|:|||||..||:. :.:||::||:.||:|::||||
BPUM_2012___y      1 MIKAKVSVTLLALMLLTGCLYPENRKTE-NRVPYEEQLQSVQTAIEEFQK     49

BSNT_03392___     51 ANGGLLPIQTKDMSTPLYQKYPIDFNRLAPRYIAEPPSTAFESGGDYQYV    100
                     |..|||||:||:..||:||||.|||.||:|||:.:.|||:||.||:|.||
BPUM_2012___y     50 ATNGLLPIETKEGDTPVYQKYVIDFKRLSPRYLHDVPSTSFEGGGEYIYV     99

BSNT_03392___    101 LVDVENDPTVKLIDLKMAEKIRDVKLRIQMYRQEHQYPPYKDVLSRDLFT    150
                     |.|||..|||||:|:||.:.|.:::|||::|:.||.||||..|:|.:|:|
BPUM_2012___y    100 LTDVEKKPTVKLLDVKMTQTISELRLRIKLYQDEHTYPPYGKVVSNNLYT    149

BSNT_03392___    151 LDEKKLGDGSSLTVTSPISGNSLPLMIDGDGEIYADYRTELTSCLKKSKK    200
                     |:|||||..|..||.||::||||||:|..:||||.|||::....||.:|:
BPUM_2012___y    150 LNEKKLGLKSPPTVMSPVTGNSLPLLISSNGEIYVDYRSDFAHILKDTKQ    199

BSNT_03392___    201 TFKPGTEIQDMIWEETPFVPAFSVKYTVNDKQEPVFLENDMKKE-    244
                     ...||..|||:.|:||||||||||.||:|.|.||.|||   ||. 
BPUM_2012___y    200 KLNPGENIQDVYWQETPFVPAFSVPYTINKKGEPDFLE---KKTS    241


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