Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03384 and BPUM_2008

See DNA alignment / Visit BSNT_03384 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_03384___mtrB.1.24716.seq
#    -bsequence pep-align/BPUM_2008___mtrB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03384___mtrB-BPUM_2008___mtrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03384___mtrB-BPUM_2008___mtrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03384___mtrB
# 2: BPUM_2008___mtrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 76
# Identity:      53/76 (69.7%)
# Similarity:    63/76 (82.9%)
# Gaps:          11/76 (14.5%)
# Score: 276.0
# 
#
#=======================================

BSNT_03384___      1 MNQKHSSDFVVIKAVEDGVNVIGLTRGTDTKFHHSEKLDKGEVIIAQFTE     50
                               :|||.|:||||||||||:||:|||||||||||||||||||
BPUM_2008___m      1 ----------MIKANENGVNVIGLTRGSDTRFHHSEKLDKGEVIIAQFTE     40

BSNT_03384___     51 HTSAIKVRGEALIQTAYGEMKSEKK-     75
                     |||||||||:|:|||::||::||.| 
BPUM_2008___m     41 HTSAIKVRGDAVIQTSFGEIQSEAKK     66


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