Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03382 and BPUM_2006
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence pep-align/BSNT_03382___ubiE.1.24716.seq
# -bsequence pep-align/BPUM_2006___ubiE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03382___ubiE-BPUM_2006___ubiE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03382___ubiE-BPUM_2006___ubiE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03382___ubiE
# 2: BPUM_2006___ubiE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 234
# Identity: 199/234 (85.0%)
# Similarity: 216/234 (92.3%)
# Gaps: 1/234 ( 0.4%)
# Score: 1076.0
#
#
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BSNT_03382___ 1 MQDSKEQRVHGVFEKIYKNYDQMNSVISFQQHKKWRDKTMRIMNVKEGAK 50
||.||||||||||||||||||||||||||:||||||||||::|||::|||
BPUM_2006___u 1 MQQSKEQRVHGVFEKIYKNYDQMNSVISFKQHKKWRDKTMKLMNVQKGAK 50
BSNT_03382___ 51 ALDVCCGTADWTIALAKAAGKSGEIKGLDFSENMLSVGEQKVKDGGFSQI 100
||||||||||||||||.|.|..||:||||||:|||||||.|||.||::||
BPUM_2006___u 51 ALDVCCGTADWTIALADAVGDKGEVKGLDFSKNMLSVGETKVKSGGYNQI 100
BSNT_03382___ 101 ELLHGNAMELPFDDDTFDYVTIGFGLRNVPDYLTVLKEMRRVVKPGGQVV 150
||||||||||||:|:||||||||||||||||||||||||.|||||||.||
BPUM_2006___u 101 ELLHGNAMELPFEDNTFDYVTIGFGLRNVPDYLTVLKEMTRVVKPGGMVV 150
BSNT_03382___ 151 CLETSQPEMIGFRQAYFMYFKYIMPFFGKLFAKSYKEYSWLQESARDFPG 200
||||||||||||:|.|::|||||||.|||||||||:|||||||||:.|||
BPUM_2006___u 151 CLETSQPEMIGFKQGYYVYFKYIMPLFGKLFAKSYQEYSWLQESAKAFPG 200
BSNT_03382___ 201 MKELAGLFEEAGLKNVKYHSFTGGVAATHIGWK- 233
|||||.|||||||.:|.||.|||||||||||.|
BPUM_2006___u 201 MKELAALFEEAGLSDVSYHPFTGGVAATHIGKKL 234
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