Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03380 and BPUM_2004

See DNA alignment / Visit BSNT_03380 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence pep-align/BSNT_03380___ndk.1.24716.seq
#    -bsequence pep-align/BPUM_2004___ndk.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03380___ndk-BPUM_2004___ndk.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03380___ndk-BPUM_2004___ndk.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03380___ndk
# 2: BPUM_2004___ndk
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 148
# Identity:     111/148 (75.0%)
# Similarity:   134/148 (90.5%)
# Gaps:           0/148 ( 0.0%)
# Score: 616.0
# 
#
#=======================================

BSNT_03380___      1 MEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYA     50
                     |:|||:|||||||:|||||:|:||||:|||||.|||||.:.:::||.||.
BPUM_2004___n      1 MDKTFLMVKPDGVERQLIGEIVSRFEKKGLQLVGAKLMSIPKEVAETHYG     50

BSNT_03380___     51 EHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGT    100
                     ||:.||||||||:||||||||||||:||.|::||||:|||||||||||||
BPUM_2004___n     51 EHKEKPFFGELVDFITSGPVFAMVWQGEQVVDVTRQMIGKTNPKEALPGT    100

BSNT_03380___    101 IRGDYGMFVGKNIIHGSDSLESAEREINIFFKNEELVSYQQLMAGWIY    148
                     ||||||:.|||||||||||.||||||||:|||.||:.::.|.::.|||
BPUM_2004___n    101 IRGDYGLTVGKNIIHGSDSPESAEREINLFFKQEEITNWDQTISSWIY    148


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