Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03376 and BPUM_2002
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_03376___aroF.1.24716.seq
# -bsequence pep-align/BPUM_2002___aroF.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03376___aroF-BPUM_2002___aroF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03376___aroF-BPUM_2002___aroF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03376___aroF
# 2: BPUM_2002___aroF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 352/396 (88.9%)
# Similarity: 370/396 (93.4%)
# Gaps: 6/396 ( 1.5%)
# Score: 1824.0
#
#
#=======================================
BSNT_03376___ 1 MKGEEVMRYLTAGESHGPQLTTIIEGVPAGLYITEEDINFELARRQKGHG 50
|||||||||||||||||||||||||||.::|||:||||||||||
BPUM_2002___a 1 ------MRYLTAGESHGPQLTTIIEGVPAGLYIEQDDINYELARRQKGHG 44
BSNT_03376___ 51 RGRRMQIEKDQAKIMSGVRHARTLGSPIALVVENNDWKHWTKIMGAAPIT 100
|||||||||||||::|||||.:||||||||||||||||||||:|||.|||
BPUM_2002___a 45 RGRRMQIEKDQAKVLSGVRHGKTLGSPIALVVENNDWKHWTKVMGAEPIT 94
BSNT_03376___ 101 EDEEKEMKRQISRPRPGHADLNGAIKYNHRDMRNVLERSSARETTVRVAA 150
|:||.||||||||||||||||||||||.||||||||||||||||||||||
BPUM_2002___a 95 EEEESEMKRQISRPRPGHADLNGAIKYGHRDMRNVLERSSARETTVRVAA 144
BSNT_03376___ 151 GAVAKKILSELGIKVAGHVLQIGAVKAEKTEYTSIEDLQRVTEESPVRCY 200
|||||:||:.||||||||||:||.|||..|.|.||||||:||||||||||
BPUM_2002___a 145 GAVAKQILAHLGIKVAGHVLEIGGVKAAHTAYESIEDLQKVTEESPVRCY 194
BSNT_03376___ 201 DEEAGKKMMAAIDEAKANGDSIGGIVEVIVEGMPVGVGSYVHYDRKLDSK 250
|.|||:|||.||||||.|||||||||||||||||||||||||||||||||
BPUM_2002___a 195 DSEAGQKMMDAIDEAKKNGDSIGGIVEVIVEGMPVGVGSYVHYDRKLDSK 244
BSNT_03376___ 251 LAAAVLSINAFKGVEFGIGFEAAGRNGSEVHDEIIWDEEKGYTRATNRLG 300
||.||||||||||||||||||||.:|||||||||||||||||||.|||||
BPUM_2002___a 245 LAGAVLSINAFKGVEFGIGFEAASKNGSEVHDEIIWDEEKGYTRKTNRLG 294
BSNT_03376___ 301 GLEGGMTTGMPIVVRGVMKPIPTLYKPLKSVDIETKEPFSASIERSDSCA 350
||||||:|||||||||||||||||||||:|||||||||||||||||||||
BPUM_2002___a 295 GLEGGMSTGMPIVVRGVMKPIPTLYKPLQSVDIETKEPFSASIERSDSCA 344
BSNT_03376___ 351 VPAASVVAEAAVAWEIANAVVEQFGLDQIDRIRENVENMRKLSREF 396
||||||||||.|||||||||||||||||||||:||||.||:|.|||
BPUM_2002___a 345 VPAASVVAEAVVAWEIANAVVEQFGLDQIDRIKENVEKMRQLQREF 390
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