Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03376 and BPUM_2002

See DNA alignment / Visit BSNT_03376 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_03376___aroF.1.24716.seq
#    -bsequence pep-align/BPUM_2002___aroF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03376___aroF-BPUM_2002___aroF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03376___aroF-BPUM_2002___aroF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03376___aroF
# 2: BPUM_2002___aroF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity:     352/396 (88.9%)
# Similarity:   370/396 (93.4%)
# Gaps:           6/396 ( 1.5%)
# Score: 1824.0
# 
#
#=======================================

BSNT_03376___      1 MKGEEVMRYLTAGESHGPQLTTIIEGVPAGLYITEEDINFELARRQKGHG     50
                           |||||||||||||||||||||||||||.::|||:||||||||||
BPUM_2002___a      1 ------MRYLTAGESHGPQLTTIIEGVPAGLYIEQDDINYELARRQKGHG     44

BSNT_03376___     51 RGRRMQIEKDQAKIMSGVRHARTLGSPIALVVENNDWKHWTKIMGAAPIT    100
                     |||||||||||||::|||||.:||||||||||||||||||||:|||.|||
BPUM_2002___a     45 RGRRMQIEKDQAKVLSGVRHGKTLGSPIALVVENNDWKHWTKVMGAEPIT     94

BSNT_03376___    101 EDEEKEMKRQISRPRPGHADLNGAIKYNHRDMRNVLERSSARETTVRVAA    150
                     |:||.||||||||||||||||||||||.||||||||||||||||||||||
BPUM_2002___a     95 EEEESEMKRQISRPRPGHADLNGAIKYGHRDMRNVLERSSARETTVRVAA    144

BSNT_03376___    151 GAVAKKILSELGIKVAGHVLQIGAVKAEKTEYTSIEDLQRVTEESPVRCY    200
                     |||||:||:.||||||||||:||.|||..|.|.||||||:||||||||||
BPUM_2002___a    145 GAVAKQILAHLGIKVAGHVLEIGGVKAAHTAYESIEDLQKVTEESPVRCY    194

BSNT_03376___    201 DEEAGKKMMAAIDEAKANGDSIGGIVEVIVEGMPVGVGSYVHYDRKLDSK    250
                     |.|||:|||.||||||.|||||||||||||||||||||||||||||||||
BPUM_2002___a    195 DSEAGQKMMDAIDEAKKNGDSIGGIVEVIVEGMPVGVGSYVHYDRKLDSK    244

BSNT_03376___    251 LAAAVLSINAFKGVEFGIGFEAAGRNGSEVHDEIIWDEEKGYTRATNRLG    300
                     ||.||||||||||||||||||||.:|||||||||||||||||||.|||||
BPUM_2002___a    245 LAGAVLSINAFKGVEFGIGFEAASKNGSEVHDEIIWDEEKGYTRKTNRLG    294

BSNT_03376___    301 GLEGGMTTGMPIVVRGVMKPIPTLYKPLKSVDIETKEPFSASIERSDSCA    350
                     ||||||:|||||||||||||||||||||:|||||||||||||||||||||
BPUM_2002___a    295 GLEGGMSTGMPIVVRGVMKPIPTLYKPLQSVDIETKEPFSASIERSDSCA    344

BSNT_03376___    351 VPAASVVAEAAVAWEIANAVVEQFGLDQIDRIRENVENMRKLSREF    396
                     ||||||||||.|||||||||||||||||||||:||||.||:|.|||
BPUM_2002___a    345 VPAASVVAEAVVAWEIANAVVEQFGLDQIDRIKENVEKMRQLQREF    390


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