Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03375 and BPUM_2001

See DNA alignment / Visit BSNT_03375 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_03375___aroB.1.24716.seq
#    -bsequence pep-align/BPUM_2001___aroB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03375___aroB-BPUM_2001___aroB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03375___aroB-BPUM_2001___aroB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03375___aroB
# 2: BPUM_2001___aroB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity:     209/363 (57.6%)
# Similarity:   283/363 (78.0%)
# Gaps:           1/363 ( 0.3%)
# Score: 1173.0
# 
#
#=======================================

BSNT_03375___      1 MKTLHVQTASSSYPVFIGQGIRKKACELLTSLNRPLTRIMLVTDEEVDRL     50
                     ||||.|:|:|::|||:||.||::...:|:||.....|::::|||..||.:
BPUM_2001___a      1 MKTLEVKTSSATYPVYIGDGIKRNIVDLMTSTGHSYTKLLIVTDTAVDAI     50

BSNT_03375___     51 YGDEMLHLLQDKWPVKKVTVPSGEQAKSMDMYTKLQSEAIRFHLDRSSCI    100
                     |||||:.||:.||.|.||.||||||:||...:..:.::||:|.|||||||
BPUM_2001___a     51 YGDEMVRLLEQKWSVHKVVVPSGEQSKSFAEFEHIHTKAIQFQLDRSSCI    100

BSNT_03375___    101 IAFGGGVVGDLAGFVAATFMRGIDFIQMPTTLLAHDSAVGGKVAVNHPLG    150
                     ||.||||:|||||||||::||||||||:||||||||||||||..:|||||
BPUM_2001___a    101 IALGGGVIGDLAGFVAASYMRGIDFIQVPTTLLAHDSAVGGKTGINHPLG    150

BSNT_03375___    151 KNLIGAFYQPKAVLYDTDFLRSLPEKELRSGMAEVIKHAFIYDRAFLEEL    200
                     |||||||:|||||:|||..|.:|.:.|:|||.|||||||.|....||:||
BPUM_2001___a    151 KNLIGAFHQPKAVIYDTSMLETLSQTEMRSGFAEVIKHALISSEDFLKEL    200

BSNT_03375___    201 LNIHSLRDITNDQLNDMIFKGISIKASVVQQDEKEEGIRAYLNFGHTLGH    250
                     ::|.||.:.:..:|..|:::||.:|||:||:||:|:|:||:||.||||||
BPUM_2001___a    201 MSIRSLDECSKSELAHMLYQGIEVKASIVQKDEREQGVRAFLNLGHTLGH    250

BSNT_03375___    251 AVEAEYGYGQITHGDAVALGMQFALYISEKTVGCEMDRKRLVSWLKSLGY    300
                     |:|||||||.||||||:|:|||||||:|||.:|..:.|..|..|:|.||:
BPUM_2001___a    251 AIEAEYGYGVITHGDAIAIGMQFALYVSEKKLGLSLHRTELKEWMKKLGF    300

BSNT_03375___    301 PSQIRKETETSVLLDRMMNDKKTRGGKIQFIVLNELGKVADHTFSRNELE    350
                     |.|:.::..|...:|||:.|||.|||.:||::|.::|.....:|::::|.
BPUM_2001___a    301 PVQVTQDISTKTFVDRMIGDKKARGGTVQFVLLKQVGDAVLQSFTKDDLH    350

BSNT_03375___    351 SWLNKWRLEETS-    362
                     .||::|:.||.. 
BPUM_2001___a    351 QWLDEWKREEGCL    363


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