Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03372 and BPUM_1999
See
DNA alignment /
Visit
BSNT_03372 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:53
# Commandline: needle
# -asequence pep-align/BSNT_03372___trpE.1.24716.seq
# -bsequence pep-align/BPUM_1999___trpE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03372___trpE-BPUM_1999___trpE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03372___trpE-BPUM_1999___trpE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03372___trpE
# 2: BPUM_1999___trpE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 517
# Identity: 347/517 (67.1%)
# Similarity: 419/517 (81.0%)
# Gaps: 4/517 ( 0.8%)
# Score: 1829.5
#
#
#=======================================
BSNT_03372___ 1 MNFQSNISAFLEDSLSHHTIPIVETFTVDTLTPIQMIEKLDREITYLLES 50
||..||::.||.||.||.|||||||.|||||:|||::|||..:|.|||||
BPUM_1999___t 1 MNSHSNVTRFLRDSESHKTIPIVETITVDTLSPIQIVEKLKADIVYLLES 50
BSNT_03372___ 51 KDDTSTWSRYSFIGLNPFLTIKEEQGCFSAADQDSKSLYTGNELKEVLNW 100
||::|:|||||||||:||||:.::|..:.|.|...:.:....|||::|:|
BPUM_1999___t 51 KDESSSWSRYSFIGLHPFLTLHDDQNEYIARDAAGQEVMKKQELKDLLDW 100
BSNT_03372___ 101 MNTTYKIKTPQLGIPFVGGAVGYLSYDMIPLIEPSVPSHTKETDMEKCML 150
|...|:||||.:.|||.||||||||||:||.|||||..|...:..:.|.|
BPUM_1999___t 101 MKEQYQIKTPDVDIPFTGGAVGYLSYDLIPSIEPSVRPHRSASTTDNCTL 150
BSNT_03372___ 151 FVCRTLIAYDHETKNVHFIQYARLNGEETKNEKMDVFHQNHLELQNLIEK 200
|||:|:||:||||.:||||||.:|.|.||::||:..:.:|..:|:.:|.|
BPUM_1999___t 151 FVCQTMIAFDHETNHVHFIQYTQLTGNETEDEKIQAYKENQKQLEQMIHK 200
BSNT_03372___ 201 MMDQKNIKELFLSADSYKTPSFETVSSNYEKSAFMADVEKIKSYIKTGDI 250
:..:.::|||.||.:..::||||.|:|.|||..|:.||||||.||:.|||
BPUM_1999___t 201 LHTKIDMKELILSGNMNESPSFEHVTSTYEKEQFLKDVEKIKEYIRAGDI 250
BSNT_03372___ 251 FQGVLSQKFEVPIKADAFELYRVLRIVNPSPYMYYMKLLDREIVGSSPER 300
|||||||:|::|:...:|||||||||||||||||:|||.||::|||||||
BPUM_1999___t 251 FQGVLSQRFDIPVSVSSFELYRVLRIVNPSPYMYFMKLKDRDLVGSSPER 300
BSNT_03372___ 301 LIHVQDGHLEIHPIAGTRKRGADKAEDERLKVELMKDEKEKAEHYMLVDL 350
|||.::.:||||||||||||||.|.||..|..||::||||||||||||||
BPUM_1999___t 301 LIHAKNRNLEIHPIAGTRKRGATKEEDAALARELLEDEKEKAEHYMLVDL 350
BSNT_03372___ 351 ARNDIGRVAEYGSVSVPEFTKIVSFSHVMHIISVVTGRLKKGVHPVDALM 400
||||:||||||||||||.|||:|:|||||||||:|||:||:..|||||||
BPUM_1999___t 351 ARNDVGRVAEYGSVSVPTFTKVVNFSHVMHIISIVTGKLKQDTHPVDALM 400
BSNT_03372___ 401 SAFPAGTLTGAPKIRAMQLLQELEPTPRETYGGCIAYIGFDGNIDSCITI 450
||||||||||||||||||||.|:||.||||||||||||||||||||||||
BPUM_1999___t 401 SAFPAGTLTGAPKIRAMQLLNEMEPEPRETYGGCIAYIGFDGNIDSCITI 450
BSNT_03372___ 451 RTMSVKNGVASIQAGAGIVADSVPEAEYEESCNKAGALLKTIHIAEDMFH 500
|||||||..||||||||||||||||.|:||:||||||||:.|.:||.:|.
BPUM_1999___t 451 RTMSVKNQTASIQAGAGIVADSVPENEWEETCNKAGALLRAIQLAEHIFS 500
BSNT_03372___ 501 SKEDKADEQ--ISTIVR 515
.||...||. |||.
BPUM_1999___t 501 EKESVQDESATISTC-- 515
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.