Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03369 and BPUM_1997

See DNA alignment / Visit BSNT_03369 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:53
# Commandline: needle
#    -asequence pep-align/BSNT_03369___trpC.1.24716.seq
#    -bsequence pep-align/BPUM_1997___trpC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03369___trpC-BPUM_1997___trpC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03369___trpC-BPUM_1997___trpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03369___trpC
# 2: BPUM_1997___trpC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 250
# Identity:     168/250 (67.2%)
# Similarity:   209/250 (83.6%)
# Gaps:           0/250 ( 0.0%)
# Score: 856.0
# 
#
#=======================================

BSNT_03369___      1 MLEKIIKQKKEEVKTLVLPVEQPFEKRSFKEALASPNRFIGLIAEVKKAS     50
                     ||.:||.:|||.::||.||.:..||:|||||||.:.:|.|||||||||||
BPUM_1997___t      1 MLNQIIARKKEHIQTLQLPDDGHFERRSFKEALVNTHRSIGLIAEVKKAS     50

BSNT_03369___     51 PSKGLIKEDFVPVQIAIDYEAAKADAISVLTDTPFFQGENSYLSDVKRAV    100
                     ||||:|:.:|.|:|.|..||.:.||.:|||||.|||||:|.|||.:|:.:
BPUM_1997___t     51 PSKGIIQPNFDPLQTAKAYEKSNADCLSVLTDEPFFQGKNEYLSLIKKHI    100

BSNT_03369___    101 SIPVLRKDFILDSLQVEESRRIGADAILLIGEVLDPLHLHELYLEAGEKG    150
                     :.|:||||||:||:|:||||||||||||||||||:|..|||||:||.|||
BPUM_1997___t    101 ARPILRKDFIIDSIQIEESRRIGADAILLIGEVLEPQQLHELYIEAKEKG    150

BSNT_03369___    151 MDVLVEVHDASTLEQILKVFTPDILGVNNRNLKTFETSVKQTEQIASLVP    200
                     :|:|||||.|.||||||.:|||:|:||||||||||.|:|:||::||.|||
BPUM_1997___t    151 LDILVEVHAAETLEQILNLFTPEIIGVNNRNLKTFNTTVEQTKEIAPLVP    200

BSNT_03369___    201 KESLLVSESGIGSLEHLTFVNEHGARAVLIGESLMRQTSQRKAIHALFGE    250
                     |:.||||||||.:.:.||||.:|||.|||:||||||:.||.||:..||||
BPUM_1997___t    201 KDCLLVSESGIQTFDDLTFVKKHGASAVLVGESLMREPSQEKAVQTLFGE    250


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