Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03365 and BPUM_1994

See DNA alignment / Visit BSNT_03365 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_03365___trpA.1.24716.seq
#    -bsequence pep-align/BPUM_1994___trpA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03365___trpA-BPUM_1994___trpA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03365___trpA-BPUM_1994___trpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03365___trpA
# 2: BPUM_1994___trpA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     190/267 (71.2%)
# Similarity:   224/267 (83.9%)
# Gaps:           0/267 ( 0.0%)
# Score: 969.0
# 
#
#=======================================

BSNT_03365___      1 MFKLDLQPTEKLFIPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSD     50
                     |....|:..|||||||:|||||..|::|:||.|||.|||.|:||||.|||
BPUM_1994___t      1 MITFQLEQGEKLFIPFMTAGDPSEEITIDLALSLQAAGAHAIELGVPYSD     50

BSNT_03365___     51 PLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPV    100
                     ||||||||||||||||:.||||||||||.|:||||||.||:|||||||||
BPUM_1994___t     51 PLADGPVIQRASKRALNHGMNIVKAIELAGKMKKNGVKIPVILFTYYNPV    100

BSNT_03365___    101 LQLNKEYFFALLQENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAP    150
                     |||:.|||||||::|||.|||.||||.|||:.||:.|:|::::|||||||
BPUM_1994___t    101 LQLDTEYFFALLRKNHISGLLTPDLPFEESSELQKNCQSYDISYISLVAP    150

BSNT_03365___    151 TSESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVP    200
                     ||:.||..|:|||||||||||||||||||..|:.|:..||:.||.||.:|
BPUM_1994___t    151 TSKERLVNIVEQAEGFVYCVSSLGVTGVRQTFDESITDFIQQVKQLSHIP    200

BSNT_03365___    201 VAVGFGISNREQVIKMNEISDGVVVGSALVRKIEELKDRLISAETRNQAL    250
                     ||||||||.||||..||::|||||||||||:|||||.|:|::::||..||
BPUM_1994___t    201 VAVGFGISTREQVDSMNKLSDGVVVGSALVKKIEELHDQLLASDTRQDAL    250

BSNT_03365___    251 QEFEDYAMAFSGLYSLK    267
                     :|||.||..||.|||.|
BPUM_1994___t    251 REFETYAKTFSPLYSFK    267


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