Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03357 and BPUM_1988

See DNA alignment / Visit BSNT_03357 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_03357___ypiF.1.24716.seq
#    -bsequence pep-align/BPUM_1988___ypiF.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03357___ypiF-BPUM_1988___ypiF.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03357___ypiF-BPUM_1988___ypiF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03357___ypiF
# 2: BPUM_1988___ypiF
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:      67/149 (45.0%)
# Similarity:    98/149 (65.8%)
# Gaps:           2/149 ( 1.3%)
# Score: 336.0
# 
#
#=======================================

BSNT_03357___      1 MRWRITDAKDYLQAKDYIDTAVIPLINIRVNNHFKMAAEKGEFTQLLSEE     50
                     |::...||..:||:|||||||:|||:.|.. |..|.....||||.|::||
BPUM_1988___y      1 MKFHAEDADRFLQSKDYIDTAIIPLVGIDA-NQIKQTVSLGEFTILVAEE     49

BSNT_03357___     51 LERQLKGRVYLLPPYTYVDRNEITVQGLKDLREELITEFPHVVLLTSDES    100
                     |||||||||:|.|.:|||:.|:..::.:..:::.|...|.||||::||..
BPUM_1988___y     50 LERQLKGRVFLFPSHTYVEINDRKLEDIFTMKQSLEDHFQHVVLISSDHG     99

BSNT_03357___    101 WRAEDALGK-MIVTPSVPLEHLNDSLKRKILDERTAEILNVLLQLWSTS    148
                     |:..:.:.: :.:...||||||...||:||:.:...:|||.|||.|:.|
BPUM_1988___y    100 WKEHEPVSESLFLLKPVPLEHLKVELKQKIVQDSVEQILNFLLQKWNPS    148


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