Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03356 and BPUM_1987

See DNA alignment / Visit BSNT_03356 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_03356___qcrA.1.24716.seq
#    -bsequence pep-align/BPUM_1987___qcrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03356___qcrA-BPUM_1987___qcrA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03356___qcrA-BPUM_1987___qcrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: BPUM_1987___qcrA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 168
# Identity:     149/168 (88.7%)
# Similarity:   158/168 (94.0%)
# Gaps:           1/168 ( 0.6%)
# Score: 817.0
# 
#
#=======================================

BSNT_03356___      1 MGGK-HDISRRQFLNYTLTGVGGFMAASMLMPMVRFALDPVLKSTGKQDM     49
                     |..| |.:|||||||||||||||||||.|||||||||||||||.|..|||
BPUM_1987___q      1 MSEKRHGVSRRQFLNYTLTGVGGFMAAGMLMPMVRFALDPVLKGTEDQDM     50

BSNT_03356___     50 VQVVSVDELTKEPQRFDFKINQVDAWYESEESRSAWVFKNGDEIVALSPI     99
                     |||||||||||||:||||||:||||||||:|||||||:|.||||||||||
BPUM_1987___q     51 VQVVSVDELTKEPKRFDFKIDQVDAWYESKESRSAWVYKEGDEIVALSPI    100

BSNT_03356___    100 CKHLGCTVNWNSDPKNPNKFFCPCHYGLYEKDGTNVPGTPPLAPLDHYEQ    149
                     |||||||||||||||||||||||||||||:||||||||||||||||||:|
BPUM_1987___q    101 CKHLGCTVNWNSDPKNPNKFFCPCHYGLYDKDGTNVPGTPPLAPLDHYKQ    150

BSNT_03356___    150 EVKDGFLYLGKAKPKGEG    167
                     :||||:||||||.|||||
BPUM_1987___q    151 QVKDGYLYLGKAVPKGEG    168


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