Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03356 and BPUM_1987

See Amino acid alignment / Visit BSNT_03356 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence dna-align/BSNT_03356___qcrA.1.24716.seq
#    -bsequence dna-align/BPUM_1987___qcrA.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03356___qcrA-BPUM_1987___qcrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03356___qcrA-BPUM_1987___qcrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03356___qcrA
# 2: BPUM_1987___qcrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 507
# Identity:     407/507 (80.3%)
# Similarity:   407/507 (80.3%)
# Gaps:           3/507 ( 0.6%)
# Score: 1636.0
# 
#
#=======================================

BSNT_03356___      1 ATGGGCGGAAA---ACATGATATATCCAGACGTCAATTTTTGAATTACAC     47
                     |||.|||..||   |||||...|.|||||.||||||||||||||||||||
BPUM_1987___q      1 ATGAGCGAGAAGAGACATGGAGTGTCCAGGCGTCAATTTTTGAATTACAC     50

BSNT_03356___     48 GCTCACAGGCGTAGGAGGTTTTATGGCGGCTAGTATGCTCATGCCTATGG     97
                     |.|.||.|||||.||.||.||||||||.|||.|.||||||||||||||||
BPUM_1987___q     51 GTTGACCGGCGTGGGGGGATTTATGGCCGCTGGAATGCTCATGCCTATGG    100

BSNT_03356___     98 TTCGCTTCGCACTCGACCCGGTATTAAAATCGACAGGGAAGCAGGATATG    147
                     |||||||.||.||.|||||.||..|||||...||||.|.|.|||||||||
BPUM_1987___q    101 TTCGCTTTGCGCTTGACCCTGTGCTAAAAGGAACAGAGGATCAGGATATG    150

BSNT_03356___    148 GTTCAGGTTGTCAGCGTTGATGAGTTGACAAAAGAGCCGCAGCGCTTTGA    197
                     |||||.||||||||.||||||||..||||.||.||.|||.||||||||||
BPUM_1987___q    151 GTTCAAGTTGTCAGTGTTGATGAACTGACGAAGGAACCGAAGCGCTTTGA    200

BSNT_03356___    198 TTTTAAAATTAATCAAGTCGATGCCTGGTATGAGTCAGAAGAGTCAAGAT    247
                     .|||||||||.|||||||.|||||.||||||||||||.|.||.||.||.|
BPUM_1987___q    201 CTTTAAAATTGATCAAGTAGATGCATGGTATGAGTCAAAGGAATCTAGGT    250

BSNT_03356___    248 CAGCCTGGGTCTTCAAAAACGGGGATGAAATTGTAGCACTTTCGCCAATT    297
                     ||||.|||||.|.||||.|.||||||||||||||.||..|.||||||||.
BPUM_1987___q    251 CAGCATGGGTGTACAAAGAAGGGGATGAAATTGTCGCTTTATCGCCAATC    300

BSNT_03356___    298 TGTAAACATTTAGGGTGTACGGTGAACTGGAATAGTGATCCTAAAAACCC    347
                     ||||||||||||||.|||||.|||||||||||.||||||||.|||||.||
BPUM_1987___q    301 TGTAAACATTTAGGATGTACAGTGAACTGGAACAGTGATCCGAAAAATCC    350

BSNT_03356___    348 GAATAAATTCTTTTGTCCATGCCATTACGGACTCTATGAAAAGGACGGCA    397
                     .||.|||||.||.||.|||||||||||.||.||.||.||.|||||.||.|
BPUM_1987___q    351 AAACAAATTTTTCTGCCCATGCCATTATGGGCTGTACGACAAGGATGGTA    400

BSNT_03356___    398 CCAATGTCCCTGGCACGCCGCCGCTTGCGCCTCTTGATCATTATGAGCAA    447
                     |.||.||.||.||.||.|||||.|||||.||.|||||.||||||.||||.
BPUM_1987___q    401 CAAACGTACCCGGAACTCCGCCACTTGCACCGCTTGACCATTATAAGCAG    450

BSNT_03356___    448 GAAGTAAAAGACGGCTTCCTGTATCTTGGAAAAGCAAAGCCTAAGGGGGA    497
                     .||||.||.|||||.|.|||.||||||||||||||...|||.||.|||||
BPUM_1987___q    451 CAAGTGAAGGACGGATACCTCTATCTTGGAAAAGCTGTGCCGAAAGGGGA    500

BSNT_03356___    498 AGGGTGA    504
                     |||||.|
BPUM_1987___q    501 AGGGTAA    507


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