Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_03354 and BPUM_1985

See DNA alignment / Visit BSNT_03354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence pep-align/BSNT_03354___qcrC.1.24716.seq
#    -bsequence pep-align/BPUM_1985___qcrC.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_03354___qcrC-BPUM_1985___qcrC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03354___qcrC-BPUM_1985___qcrC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03354___qcrC
# 2: BPUM_1985___qcrC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 255
# Identity:     205/255 (80.4%)
# Similarity:   236/255 (92.5%)
# Gaps:           0/255 ( 0.0%)
# Score: 1145.0
# 
#
#=======================================

BSNT_03354___      1 MHRGKGMKFVGDSRIPAEKKPNIPKDYSEYPGKTEAFWPNFLLKEWMVGA     50
                     ||||||||||||||||||:|||||||||||||||||||||||||||:|||
BPUM_1985___q      1 MHRGKGMKFVGDSRIPAERKPNIPKDYSEYPGKTEAFWPNFLLKEWLVGA     50

BSNT_03354___     51 VFLIGFLVLTIVHQPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEYAAG    100
                     ||||||||||:||.||||||||||||||||||||||||||||||||:|||
BPUM_1985___q     51 VFLIGFLVLTVVHAPPLERMADPTDTGYIPLPDWYFLFLYQLLKYEFAAG    100

BSNT_03354___    101 SFTVVGAMIMPGLAFGALLLAPFLDRGTERRPWKRPVAVGMMLLAISAAV    150
                     .:||||||||||:||||||||||||.|.||||::||||||||:||:.||.
BPUM_1985___q    101 GYTVVGAMIMPGIAFGALLLAPFLDSGPERRPYRRPVAVGMMILAVGAAT    150

BSNT_03354___    151 FLTWQSVATHDWAKAEEQGKITKEADIDTNAEGYKVFKEQGCISCHGDNL    200
                     :|||:|||||||..|.:||:|.|||:|||:|..||:::||.||||||||:
BPUM_1985___q    151 YLTWESVATHDWEAAAKQGEIKKEAEIDTSAAEYKIYQEQTCISCHGDNM    200

BSNT_03354___    201 QGGAAGPSLVDSGLKPDEIKKIAVEGKGKMPAGVFKGNDKQLEELAKFIS    250
                     |||||||||||:||.|:||.||||||||.||.|:|||:|::||:|:|::|
BPUM_1985___q    201 QGGAAGPSLVDNGLAPEEIAKIAVEGKGNMPKGIFKGSDEELEKLSKYLS    250

BSNT_03354___    251 ETTAK    255
                     |..:|
BPUM_1985___q    251 EVKSK    255


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